Description : Ribosomal protein L16p/L10e family protein
Gene families : OG0002582 (Archaeplastida) Phylogenetic Tree(s): OG0002582_tree ,
OG_05_0002513 (LandPlants) Phylogenetic Tree(s): OG_05_0002513_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c7_22400V3.1 | |
Cluster | HCCA: Cluster_124 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00072p00080890 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | Archaeplastida | |
AMTR_s00077p00151750 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | Archaeplastida | |
AT1G14320 | SAC52, RPL10, RPL10A | Ribosomal protein L16p/L10e family protein | 0.36 | Archaeplastida | |
AT1G26910 | RPL10B | Ribosomal protein L16p/L10e family protein | 0.04 | Archaeplastida | |
Cpa|evm.model.tig00001424.5 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.2 | Archaeplastida | |
GSVIVT01001137001 | No alias | 60S ribosomal protein L10 OS=Vitis riparia | 0.17 | Archaeplastida | |
GSVIVT01024537001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | Archaeplastida | |
Gb_06067 | No alias | component RPL10 of LSU proteome component | 0.11 | Archaeplastida | |
LOC_Os11g11390.1 | No alias | component RPL10 of LSU proteome component | 0.07 | Archaeplastida | |
MA_17326g0010 | No alias | component RPL10 of LSU proteome component | 0.26 | Archaeplastida | |
Mp4g23990.1 | No alias | component RPL10 of LSU proteome component | 0.31 | Archaeplastida | |
Smo437527 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | Archaeplastida | |
Solyc06g007520.4.1 | No alias | component RPL10 of LSU proteome component | 0.28 | Archaeplastida | |
Solyc06g082650.4.1 | No alias | component RPL10 of LSU proteome component | 0.29 | Archaeplastida | |
Solyc06g082670.3.1 | No alias | component RPL10 of LSU proteome component | 0.24 | Archaeplastida | |
Zm00001e004933_P001 | No alias | component RPL10 of LSU proteome component | 0.1 | Archaeplastida | |
Zm00001e012474_P002 | No alias | component RPL10 of LSU proteome component | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0009451 | RNA modification | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016180 | Ribosomal_L10e/L16 | 12 | 166 |
No external refs found! |