Pp3c7_22780V3.1

Description : No annotation

Gene families : OG0006518 (Archaeplastida) Phylogenetic Tree(s): OG0006518_tree ,
OG_05_0004191 (LandPlants) Phylogenetic Tree(s): OG_05_0004191_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c7_22780V3.1
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method
Pp3c11_8630V3.1	No alias	No annotation	0.01	Archaeplastida
Pp3c16_11240V3.1	No alias	No annotation	0.02	Archaeplastida
Pp3c22_17170V3.1	No alias	No annotation	0.02	Archaeplastida
Pp3c2_17790V3.1	No alias	No annotation	0.04	Archaeplastida
Pp3c3_22840V3.1	No alias	No annotation	0.03	Archaeplastida
Pp3c6_15820V3.1	No alias	No annotation	0.02	Archaeplastida
Pp3c7_2630V3.1	No alias	No annotation	0.03	Archaeplastida
Pp3c8_1100V3.1	No alias	No annotation	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006313	transposition, DNA-mediated	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0032196	transposition	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0022607	cellular component assembly	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
BP	GO:0043933	protein-containing complex subunit organization	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002492	Transposase_Tc1-like	64	119
IPR038717	Tc1-like_DDE_dom	130	281

External Links

No external refs found!