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  5. Pp3c7_23740V3.1

Pp3c7_23740V3.1


Description : tetraspanin8


Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_23740V3.1
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00136590 evm_27.TU.AmTr_v1... Tetraspanin-8 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00108p00058320 evm_27.TU.AmTr_v1... Tetraspanin-6 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G23810 TET8 tetraspanin8 0.05 Archaeplastida
AT3G12090 TET6 tetraspanin6 0.03 Archaeplastida
AT4G23410 TET5 tetraspanin5 0.04 Archaeplastida
GSVIVT01023726001 No alias Tetraspanin-8 OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os02g12750.1 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g25760.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_13870g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_139843g0010 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_909581g0010 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Pp3c2_26590V3.1 No alias tetraspanin8 0.01 Archaeplastida
Smo266767 No alias Tetraspanin-8 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc03g059390.3.1 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g069320.4.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc07g006280.3.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g010570.1.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g038410.2.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e028243_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e029484_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e029513_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e039133_P001 No alias Protein TORNADO 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
MF GO:0008198 ferrous iron binding IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!