1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c7_2900V3.1

Pp3c7_2900V3.1


Description : BAH domain ;TFIIS helical bundle-like domain


Gene families : OG0001277 (Archaeplastida) Phylogenetic Tree(s): OG0001277_tree ,
OG_05_0002284 (LandPlants) Phylogenetic Tree(s): OG_05_0002284_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_2900V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT3G48050 No alias BAH domain ;TFIIS helical bundle-like domain 0.09 Archaeplastida
AT3G48060 No alias BAH domain ;TFIIS helical bundle-like domain 0.07 Archaeplastida
Cpa|evm.model.tig00001215.1 No alias No description available 0.01 Archaeplastida
Cre06.g292650 No alias No description available 0.02 Archaeplastida
GSVIVT01007806001 No alias No description available 0.09 Archaeplastida
GSVIVT01032521001 No alias No description available 0.05 Archaeplastida
Gb_02775 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_05690 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g50840.2 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g50850.2 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_10428034g0020 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_24475g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_39143g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_39143g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_710118g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp4g16160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g16230.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc03g114060.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc06g071350.4.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e002441_P003 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e037792_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e037793_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!