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  5. Pp3c7_3950V3.1

Pp3c7_3950V3.1


Description : RNA binding


Gene families : OG0003475 (Archaeplastida) Phylogenetic Tree(s): OG0003475_tree ,
OG_05_0008439 (LandPlants) Phylogenetic Tree(s): OG_05_0008439_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_3950V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00188130 evm_27.TU.AmTr_v1... Flowering time control protein FPA OS=Arabidopsis thaliana 0.02 Archaeplastida
AT4G12640 No alias RNA recognition motif (RRM)-containing protein 0.03 Archaeplastida
Cpa|evm.model.tig00021532.11 No alias No description available 0.02 Archaeplastida
GSVIVT01010842001 No alias Flowering time control protein FPA OS=Arabidopsis thaliana 0.07 Archaeplastida
LOC_Os09g12730.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os09g34070.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.06 Archaeplastida
MA_61973g0010 No alias Flowering time control protein FPA OS=Arabidopsis... 0.1 Archaeplastida
Mp4g06830.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.04 Archaeplastida
Solyc06g053320.4.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.07 Archaeplastida
Solyc12g011050.2.1 No alias Flowering time control protein FPA OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e034721_P001 No alias Flowering time control protein FPA OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!