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  5. Pp3c7_5540V3.1

Pp3c7_5540V3.1


Description : C3HC zinc finger-like


Gene families : OG0002600 (Archaeplastida) Phylogenetic Tree(s): OG0002600_tree ,
OG_05_0002528 (LandPlants) Phylogenetic Tree(s): OG_05_0002528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_5540V3.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G17210 ATILP1, ILP1 IAP-like protein 1 0.03 Archaeplastida
LOC_Os07g05610.2 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp4g04310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo421398 No alias No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!