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  5. Pp3c7_560V3.1

Pp3c7_560V3.1


Description : RING/U-box superfamily protein


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_560V3.1
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263520 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AMTR_s00012p00250160 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012890001 No alias No description available 0.03 Archaeplastida
GSVIVT01020764001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01020765001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os03g16480.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os03g22830.2 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.02 Archaeplastida
LOC_Os03g26300.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g41520.1 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.03 Archaeplastida
LOC_Os06g10800.1 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.04 Archaeplastida
LOC_Os11g05200.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g37230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_110029g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 Archaeplastida
MA_50561g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp5g05250.1 No alias AIP2 signal transducer of abscisic acid perception 0.04 Archaeplastida
Solyc01g009000.3.1 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.03 Archaeplastida
Solyc09g074460.3.1 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e004520_P001 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e039308_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!