Pp3c7_6560V3.1

Description : cold, circadian rhythm, and RNA binding 1

Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0000481 (LandPlants) Phylogenetic Tree(s): OG_05_0000481_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c7_6560V3.1
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00043p00170970	evm_27.TU.AmTr_v1...	RNA processing.organelle machineries.RNA...	0.02	Archaeplastida
AMTR_s00114p00125610	evm_27.TU.AmTr_v1...	Small RNA-binding protein 11, chloroplastic...	0.01	Archaeplastida
AT4G39260	CCR1, GR-RBP8,...	cold, circadian rhythm, and RNA binding 1	0.06	Archaeplastida
MA_10436734g0010	No alias	RNA editing factor (ORRM)	0.01	Archaeplastida
MA_28218g0010	No alias	RNA editing factor (ORRM)	0.02	Archaeplastida
Zm00001e003947_P001	No alias	RNA editing factor (CP31)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006801	superoxide metabolic process	IEP	Neighborhood
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	10	78

External Links

No external refs found!