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  5. Pp3c7_8530V3.1

Pp3c7_8530V3.1


Description : DEAD box RNA helicase 1


Gene families : OG0000695 (Archaeplastida) Phylogenetic Tree(s): OG0000695_tree ,
OG_05_0001582 (LandPlants) Phylogenetic Tree(s): OG_05_0001582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_8530V3.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cre12.g540200 No alias DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa... 0.04 Archaeplastida
GSVIVT01016847001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
GSVIVT01032442001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Mp1g25330.1 No alias DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.05 Archaeplastida
Solyc01g057760.4.1 No alias DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis... 0.02 Archaeplastida
Solyc12g035130.2.1 No alias ATP-dependent RNA helicase-like protein DB10... 0.02 Archaeplastida
Zm00001e011376_P001 No alias ATP-dependent RNA helicase-like protein DB10... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!