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  5. Pp3c7_8710V3.1

Pp3c7_8710V3.1


Description : Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein


Gene families : OG0002916 (Archaeplastida) Phylogenetic Tree(s): OG0002916_tree ,
OG_05_0001878 (LandPlants) Phylogenetic Tree(s): OG_05_0001878_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_8710V3.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00114640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.05 Archaeplastida
AMTR_s00049p00181100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 Archaeplastida
AT3G48430 REF6 relative of early flowering 6 0.1 Archaeplastida
AT5G04240 ELF6 Zinc finger (C2H2 type) family protein / transcription... 0.02 Archaeplastida
GSVIVT01007564001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.04 Archaeplastida
Gb_15929 No alias transcription factor (JUMONJI) 0.02 Archaeplastida
LOC_Os03g05680.1 No alias transcription factor (JUMONJI) 0.04 Archaeplastida
LOC_Os12g18150.1 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.03 Archaeplastida
MA_138058g0010 No alias transcription factor (JUMONJI) 0.02 Archaeplastida
Mp3g07610.1 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.07 Archaeplastida
Solyc03g111590.4.1 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.04 Archaeplastida
Solyc04g028560.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc04g028580.3.1 No alias transcription factor (JUMONJI) 0.04 Archaeplastida
Zm00001e028534_P001 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.02 Archaeplastida
Zm00001e038984_P001 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.02 Archaeplastida
Zm00001e039647_P002 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!