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  5. Pp3c8_11400V3.1

Pp3c8_11400V3.1


Description : DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain


Gene families : OG0001463 (Archaeplastida) Phylogenetic Tree(s): OG0001463_tree ,
OG_05_0002028 (LandPlants) Phylogenetic Tree(s): OG_05_0002028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_11400V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT5G60410 SIZ1, ATSIZ1 DNA-binding protein with MIZ/SP-RING zinc finger,... 0.02 Archaeplastida
Cre12.g500900 No alias Protein degradation.peptide... 0.03 Archaeplastida
GSVIVT01025151001 No alias Protein degradation.peptide... 0.03 Archaeplastida
Gb_29862 No alias SUMO E3 ligase (SIZ1) 0.06 Archaeplastida
Gb_39019 No alias SUMO E3 ligase (SIZ1) 0.03 Archaeplastida
Gb_39446 No alias SUMO E3 ligase (SIZ1) 0.03 Archaeplastida
LOC_Os03g50980.1 No alias SUMO E3 ligase (SIZ1) 0.03 Archaeplastida
LOC_Os05g03430.1 No alias SUMO E3 ligase (SIZ1) 0.06 Archaeplastida
MA_10436942g0020 No alias SUMO E3 ligase (SIZ1) 0.02 Archaeplastida
MA_10436970g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_83870g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp6g08590.1 No alias SUMO E3 ligase (SIZ1) 0.05 Archaeplastida
Solyc11g069160.3.1 No alias SUMO E3 ligase (SIZ1) 0.08 Archaeplastida
Zm00001e027582_P001 No alias SUMO E3 ligase (SIZ1) 0.06 Archaeplastida
Zm00001e029498_P003 No alias SUMO E3 ligase (SIZ1) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!