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  5. Pp3c8_13170V3.1

Pp3c8_13170V3.1


Description : CTC-interacting domain 11


Gene families : OG0000719 (Archaeplastida) Phylogenetic Tree(s): OG0000719_tree ,
OG_05_0001092 (LandPlants) Phylogenetic Tree(s): OG_05_0001092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_13170V3.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g02330.1 No alias Polyadenylate-binding protein-interacting protein 11... 0.02 Archaeplastida
MA_4300g0010 No alias Polyadenylate-binding protein-interacting protein 12... 0.02 Archaeplastida
Smo66365 No alias Polyadenylate-binding protein-interacting protein 11... 0.02 Archaeplastida
Zm00001e016496_P002 No alias Polyadenylate-binding protein-interacting protein 9... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR009818 Ataxin-2_C 156 170
IPR000504 RRM_dom 318 385
IPR000504 RRM_dom 221 283
No external refs found!