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  5. Pp3c8_16130V3.1

Pp3c8_16130V3.1


Description : Ribosomal protein L14p/L23e family protein


Gene families : OG0001339 (Archaeplastida) Phylogenetic Tree(s): OG0001339_tree ,
OG_05_0001717 (LandPlants) Phylogenetic Tree(s): OG_05_0001717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_16130V3.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00206470 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
AT1G04480 No alias Ribosomal protein L14p/L23e family protein 0.19 Archaeplastida
AT2G33370 No alias Ribosomal protein L14p/L23e family protein 0.23 Archaeplastida
AT3G04400 emb2171 Ribosomal protein L14p/L23e family protein 0.23 Archaeplastida
Cpa|evm.model.tig00021290.9 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
Cre04.g211800 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.34 Archaeplastida
GSVIVT01027905001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 Archaeplastida
GSVIVT01028407001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
Gb_21541 No alias component RPL23 of LSU proteome component 0.12 Archaeplastida
LOC_Os02g56960.1 No alias component RPL23 of LSU proteome component 0.22 Archaeplastida
LOC_Os03g04590.1 No alias component RPL23 of LSU proteome component 0.22 Archaeplastida
LOC_Os10g32920.1 No alias component RPL23 of LSU proteome component 0.24 Archaeplastida
MA_10429866g0030 No alias 60S ribosomal protein L23 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_10432200g0010 No alias component RPL23 of LSU proteome component 0.23 Archaeplastida
MA_950121g0010 No alias component RPL23 of LSU proteome component 0.02 Archaeplastida
Mp6g14310.1 No alias component RPL23 of LSU proteome component 0.08 Archaeplastida
Smo165708 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Solyc06g008170.3.1 No alias component RPL23 of LSU proteome component 0.28 Archaeplastida
Solyc06g083780.3.1 No alias component RPL23 of LSU proteome component 0.25 Archaeplastida
Solyc09g072865.1.1 No alias component RPL23 of LSU proteome component 0.2 Archaeplastida
Solyc09g090610.3.1 No alias component RPL23 of LSU proteome component 0.24 Archaeplastida
Zm00001e000323_P001 No alias component RPL23 of LSU proteome component 0.19 Archaeplastida
Zm00001e012721_P001 No alias component RPL23 of LSU proteome component 0.19 Archaeplastida
Zm00001e023614_P001 No alias component RPL23 of LSU proteome component 0.16 Archaeplastida
Zm00001e038953_P001 No alias component RPL23 of LSU proteome component 0.26 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!