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  5. Pp3c8_19010V3.1

Pp3c8_19010V3.1


Description : SIN3-like 4


Gene families : OG0000780 (Archaeplastida) Phylogenetic Tree(s): OG0000780_tree ,
OG_05_0001649 (LandPlants) Phylogenetic Tree(s): OG_05_0001649_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_19010V3.1
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
AT1G24190 SNL3, ATSIN3, SIN3 SIN3-like 3 0.02 Archaeplastida
Cpa|evm.model.tig00001155.28 No alias Paired amphipathic helix protein Sin3-like 1... 0.02 Archaeplastida
Cpa|evm.model.tig00021234.23 No alias Paired amphipathic helix protein Sin3-like 3... 0.02 Archaeplastida
GSVIVT01020136001 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
GSVIVT01032579001 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
Gb_35988 No alias component SNL of histone deacetylase machineries 0.02 Archaeplastida
LOC_Os08g25200.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_18241g0010 No alias component SNL of histone deacetylase machineries 0.03 Archaeplastida
Mp7g11300.1 No alias Paired amphipathic helix protein Sin3-like 2... 0.05 Archaeplastida
Pp3c24_16180V3.1 No alias SIN3-like 4 0.02 Archaeplastida
Pp3c8_14940V3.1 No alias SIN3-like 4 0.03 Archaeplastida
Solyc02g067570.3.1 No alias component SNL of histone deacetylase machineries 0.02 Archaeplastida
Zm00001e017111_P002 No alias component SNL of histone deacetylase machineries 0.02 Archaeplastida
Zm00001e025644_P001 No alias component SNL of histone deacetylase machineries 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!