AT5G02160


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0008328 (Archaeplastida) Phylogenetic Tree(s): OG0008328_tree ,
OG_05_0008486 (LandPlants) Phylogenetic Tree(s): OG_05_0008486_tree ,
OG_06_0009888 (SeedPlants) Phylogenetic Tree(s): OG_06_0009888_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G02160
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00250250 evm_27.TU.AmTr_v1... No description available 0.1 Archaeplastida
Pp3c13_7350V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c3_5420V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
BP GO:0009965 leaf morphogenesis RCA Interproscan
BP GO:0030003 cellular cation homeostasis RCA Interproscan
BP GO:0030154 cell differentiation RCA Interproscan
BP GO:0043085 positive regulation of catalytic activity RCA Interproscan
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Interproscan
BP GO:0070838 divalent metal ion transport RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0002218 activation of innate immune response IEP Neighborhood
BP GO:0002238 response to molecule of fungal origin IEP Neighborhood
BP GO:0002253 activation of immune response IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004565 beta-galactosidase activity IEP Neighborhood
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005372 water transmembrane transporter activity IEP Neighborhood
CC GO:0005782 peroxisomal matrix IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Neighborhood
CC GO:0009526 plastid envelope IEP Neighborhood
CC GO:0009534 chloroplast thylakoid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009631 cold acclimation IEP Neighborhood
BP GO:0009641 shade avoidance IEP Neighborhood
BP GO:0009704 de-etiolation IEP Neighborhood
BP GO:0009765 photosynthesis, light harvesting IEP Neighborhood
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP Neighborhood
BP GO:0009870 defense response signaling pathway, resistance gene-dependent IEP Neighborhood
CC GO:0009941 chloroplast envelope IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010161 red light signaling pathway IEP Neighborhood
CC GO:0010287 plastoglobule IEP Neighborhood
BP GO:0010600 regulation of auxin biosynthetic process IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
MF GO:0015250 water channel activity IEP Neighborhood
MF GO:0015925 galactosidase activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0016560 protein import into peroxisome matrix, docking IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
CC GO:0030076 light-harvesting complex IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
CC GO:0031350 intrinsic component of plastid membrane IEP Neighborhood
CC GO:0031351 integral component of plastid membrane IEP Neighborhood
CC GO:0031352 intrinsic component of plastid inner membrane IEP Neighborhood
CC GO:0031353 integral component of plastid inner membrane IEP Neighborhood
CC GO:0031356 intrinsic component of chloroplast inner membrane IEP Neighborhood
CC GO:0031357 integral component of chloroplast inner membrane IEP Neighborhood
CC GO:0031907 microbody lumen IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
CC GO:0031976 plastid thylakoid IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
BP GO:0032350 regulation of hormone metabolic process IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:0046885 regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0070417 cellular response to cold IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0071491 cellular response to red light IEP Neighborhood
BP GO:0090354 regulation of auxin metabolic process IEP Neighborhood
MF GO:0097472 cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!