1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c8_20390V3.1

Pp3c8_20390V3.1


Description : peroxisome 1


Gene families : OG0000169 (Archaeplastida) Phylogenetic Tree(s): OG0000169_tree ,
OG_05_0007088 (LandPlants) Phylogenetic Tree(s): OG_05_0007088_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_20390V3.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00117380 evm_27.TU.AmTr_v1... Cell division control protein 48 homolog D... 0.02 Archaeplastida
AMTR_s00085p00052820 evm_27.TU.AmTr_v1... Cell division cycle protein 48 homolog OS=Glycine max 0.02 Archaeplastida
AT1G03000 PEX6 peroxin 6 0.02 Archaeplastida
AT3G01610 emb1354, CDC48C cell division cycle 48C 0.02 Archaeplastida
Cpa|evm.model.tig00021428.19 No alias Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00021463.11 No alias Cell division control protein 48 homolog A... 0.01 Archaeplastida
Cre09.g398550 No alias Cell division control protein 48 homolog C... 0.02 Archaeplastida
GSVIVT01010963001 No alias Protein translocation.peroxisome.importomer... 0.02 Archaeplastida
GSVIVT01025783001 No alias Calmodulin-interacting protein 111 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os06g01980.1 No alias Cell division control protein 48 homolog C... 0.02 Archaeplastida
Mp1g02450.1 No alias platform ATPase (CDC48) 0.02 Archaeplastida
Smo115678 No alias Protein translocation.peroxisome.importomer... 0.02 Archaeplastida
Solyc11g069720.2.1 No alias platform ATPase (CDC48) 0.02 Archaeplastida
Zm00001e000416_P002 No alias platform ATPase (CDC48) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
MF GO:0048365 Rac GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!