AT5G02260 (EXP9, EXPA9, ATEXP9,...)

Aliases : EXP9, EXPA9, ATEXP9, ATEXPA9, ATHEXP ALPHA 1.10

Description : expansin A9

Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G02260
Cluster	HCCA: Cluster_250

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00110p00103570	evm_27.TU.AmTr_v1...	Expansin-A4 OS=Arabidopsis thaliana	0.06	Archaeplastida
AMTR_s00140p00077570	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.02	Archaeplastida
AT1G20190	ATEXPA11, ATHEXP...	expansin 11	0.03	Archaeplastida
AT1G69530	ATEXPA1, EXP1,...	expansin A1	0.06	Archaeplastida
AT2G40610	EXPA8, ATHEXP...	expansin A8	0.04	Archaeplastida
AT4G01630	ATHEXP ALPHA...	expansin A17	0.05	Archaeplastida
AT5G05290	EXPA2, ATHEXP...	expansin A2	0.04	Archaeplastida
AT5G39270	EXPA22, ATEXP22,...	expansin A22	0.04	Archaeplastida
GSVIVT01008762001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
GSVIVT01011437001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.04	Archaeplastida
GSVIVT01024572001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
GSVIVT01028474001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.02	Archaeplastida
GSVIVT01032681001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
Gb_04404	No alias	alpha-class expansin	0.02	Archaeplastida
Gb_06127	No alias	alpha-class expansin	0.02	Archaeplastida
LOC_Os01g16770.1	No alias	alpha-class expansin	0.02	Archaeplastida
LOC_Os01g60770.1	No alias	alpha-class expansin	0.03	Archaeplastida
LOC_Os02g16730.1	No alias	alpha-class expansin	0.02	Archaeplastida
LOC_Os02g16809.1	No alias	alpha-class expansin	0.03	Archaeplastida
LOC_Os02g51040.1	No alias	alpha-class expansin	0.03	Archaeplastida
LOC_Os03g06000.1	No alias	alpha-class expansin	0.02	Archaeplastida
LOC_Os03g06020.1	No alias	alpha-class expansin	0.03	Archaeplastida
LOC_Os03g06060.1	No alias	alpha-class expansin	0.03	Archaeplastida
LOC_Os03g25990.1	No alias	alpha-class expansin	0.02	Archaeplastida
LOC_Os03g60720.1	No alias	alpha-class expansin	0.04	Archaeplastida
LOC_Os04g15840.1	No alias	alpha-class expansin	0.03	Archaeplastida
LOC_Os05g19600.1	No alias	alpha-class expansin	0.03	Archaeplastida
LOC_Os05g39990.1	No alias	alpha-class expansin	0.04	Archaeplastida
MA_100868g0010	No alias	alpha-class expansin	0.04	Archaeplastida
MA_104065g0020	No alias	alpha-class expansin	0.02	Archaeplastida
MA_10425823g0010	No alias	alpha-class expansin	0.03	Archaeplastida
MA_10429288g0020	No alias	Expansin-A2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_114349g0010	No alias	alpha-class expansin	0.05	Archaeplastida
MA_130258g0010	No alias	alpha-class expansin	0.03	Archaeplastida
MA_275115g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_30127g0010	No alias	alpha-class expansin	0.05	Archaeplastida
MA_3618g0010	No alias	Expansin-A15 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_36587g0010	No alias	alpha-class expansin	0.04	Archaeplastida
MA_792493g0010	No alias	alpha-class expansin	0.03	Archaeplastida
MA_8784268g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp3g09750.1	No alias	alpha-class expansin	0.04	Archaeplastida
Pp3c13_20360V3.1	No alias	expansin A9	0.03	Archaeplastida
Pp3c14_18030V3.1	No alias	expansin A14	0.02	Archaeplastida
Pp3c18_19720V3.1	No alias	expansin A1	0.02	Archaeplastida
Smo179212	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
Smo230202	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.02	Archaeplastida
Smo231226	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
Smo91129	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
Solyc02g088100.3.1	No alias	alpha-class expansin	0.05	Archaeplastida
Solyc04g081870.4.1	No alias	alpha-class expansin	0.07	Archaeplastida
Solyc05g052250.3.1	No alias	alpha-class expansin	0.05	Archaeplastida
Solyc07g063210.3.1	No alias	alpha-class expansin	0.03	Archaeplastida
Solyc08g007780.3.1	No alias	Putative expansin-A30 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Solyc08g080060.4.1	No alias	alpha-class expansin	0.04	Archaeplastida
Solyc09g010860.4.1	No alias	alpha-class expansin	0.03	Archaeplastida
Solyc10g084780.3.1	No alias	alpha-class expansin	0.07	Archaeplastida
Solyc12g089380.2.1	No alias	alpha-class expansin	0.08	Archaeplastida
Zm00001e007142_P001	No alias	alpha-class expansin	0.03	Archaeplastida
Zm00001e019433_P001	No alias	alpha-class expansin	0.03	Archaeplastida
Zm00001e029218_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e037578_P001	No alias	alpha-class expansin	0.05	Archaeplastida
Zm00001e038997_P001	No alias	alpha-class expansin	0.03	Archaeplastida
Zm00001e040578_P001	No alias	alpha-class expansin	0.05	Archaeplastida
Zm00001e041376_P001	No alias	alpha-class expansin	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	ISS	Interproscan
BP	GO:0009826	unidimensional cell growth	NAS	Interproscan
BP	GO:0009827	plant-type cell wall modification	None	Extended
BP	GO:0009828	plant-type cell wall loosening	ISS	Interproscan
BP	GO:0009828	plant-type cell wall loosening	NAS	Interproscan
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0046685	response to arsenic-containing substance	RCA	Interproscan
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004673	protein histidine kinase activity	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008146	sulfotransferase activity	IEP	Neighborhood
BP	GO:0009646	response to absence of light	IEP	Neighborhood
BP	GO:0009647	skotomorphogenesis	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009733	response to auxin	IEP	Neighborhood
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	Neighborhood
BP	GO:0009739	response to gibberellin	IEP	Neighborhood
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Neighborhood
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009788	negative regulation of abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009820	alkaloid metabolic process	IEP	Neighborhood
BP	GO:0009821	alkaloid biosynthetic process	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010086	embryonic root morphogenesis	IEP	Neighborhood
BP	GO:0010104	regulation of ethylene-activated signaling pathway	IEP	Neighborhood
BP	GO:0010105	negative regulation of ethylene-activated signaling pathway	IEP	Neighborhood
BP	GO:0010119	regulation of stomatal movement	IEP	Neighborhood
BP	GO:0010411	xyloglucan metabolic process	IEP	Neighborhood
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	Neighborhood
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Neighborhood
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
BP	GO:0030856	regulation of epithelial cell differentiation	IEP	Neighborhood
BP	GO:0034599	cellular response to oxidative stress	IEP	Neighborhood
BP	GO:0034614	cellular response to reactive oxygen species	IEP	Neighborhood
BP	GO:0035690	cellular response to drug	IEP	Neighborhood
BP	GO:0042343	indole glucosinolate metabolic process	IEP	Neighborhood
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	Neighborhood
BP	GO:0045454	cell redox homeostasis	IEP	Neighborhood
BP	GO:0045604	regulation of epidermal cell differentiation	IEP	Neighborhood
BP	GO:0045682	regulation of epidermis development	IEP	Neighborhood
BP	GO:0048364	root development	IEP	Neighborhood
BP	GO:0048598	embryonic morphogenesis	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0051302	regulation of cell division	IEP	Neighborhood
BP	GO:0070297	regulation of phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0070298	negative regulation of phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0070301	cellular response to hydrogen peroxide	IEP	Neighborhood
BP	GO:0071216	cellular response to biotic stimulus	IEP	Neighborhood
BP	GO:0071219	cellular response to molecule of bacterial origin	IEP	Neighborhood
BP	GO:0071236	cellular response to antibiotic	IEP	Neighborhood
BP	GO:0071241	cellular response to inorganic substance	IEP	Neighborhood
BP	GO:0071731	response to nitric oxide	IEP	Neighborhood
BP	GO:0071732	cellular response to nitric oxide	IEP	Neighborhood
BP	GO:0090333	regulation of stomatal closure	IEP	Neighborhood
BP	GO:0097237	cellular response to toxic substance	IEP	Neighborhood
BP	GO:0097366	response to bronchodilator	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1901419	regulation of response to alcohol	IEP	Neighborhood
BP	GO:1901420	negative regulation of response to alcohol	IEP	Neighborhood
BP	GO:1901699	cellular response to nitrogen compound	IEP	Neighborhood
BP	GO:1902170	cellular response to reactive nitrogen species	IEP	Neighborhood
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Neighborhood
BP	GO:1902532	negative regulation of intracellular signal transduction	IEP	Neighborhood
BP	GO:1905957	regulation of cellular response to alcohol	IEP	Neighborhood
BP	GO:1905958	negative regulation of cellular response to alcohol	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007117	Expansin_CBD	165	242
IPR009009	RlpA-like_DPBB	67	154

External Links

No external refs found!

AT5G02260 (EXP9, EXPA9, ATEXP9,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation