AT5G02320 (ATMYB3R5, MYB3R-5)

Aliases : ATMYB3R5, MYB3R-5

Description : myb domain protein 3r-5

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000288 (LandPlants) Phylogenetic Tree(s): OG_05_0000288_tree ,
OG_06_0003085 (SeedPlants) Phylogenetic Tree(s): OG_06_0003085_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G02320
Cluster	HCCA: Cluster_260

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00225600	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00007p00169630	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00045p00146180	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00083p00123850	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00105p00025610	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00119p00105590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AT3G23250	ATMYB15, ATY19, MYB15	myb domain protein 15	0.04	Archaeplastida
AT3G28910	MYB30, ATMYB30	myb domain protein 30	0.04	Archaeplastida
AT3G47600	ATMYB94, ATMYBCP70, MYB94	myb domain protein 94	0.04	Archaeplastida
AT5G40330	ATMYBRTF, ATMYB23, MYB23	myb domain protein 23	0.01	Archaeplastida
AT5G62470	MYBCOV1, MYB96, ATMYB96	myb domain protein 96	0.04	Archaeplastida
GSVIVT01008402001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01009566001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01027493001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
GSVIVT01031496001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
Gb_03227	No alias	transcription factor (MYB)	0.03	Archaeplastida
Gb_05115	No alias	transcription factor (MYB)	0.03	Archaeplastida
Gb_09998	No alias	transcription factor (MYB)	0.02	Archaeplastida
Gb_11232	No alias	transcription factor (MYB)	0.03	Archaeplastida
Gb_22239	No alias	transcription factor (MYB)	0.03	Archaeplastida
Gb_29789	No alias	transcription factor (MYB)	0.03	Archaeplastida
Gb_29933	No alias	transcription factor (MYB)	0.02	Archaeplastida
Gb_35820	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os04g08590.1	No alias	no hits & (original description: none)	0.01	Archaeplastida
LOC_Os06g14670.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os07g43580.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os08g33940.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os10g33810.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_10225049g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_117992g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_15687g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_190973g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_278282g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_6285g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
Mp5g14610.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
Pp3c1_21610V3.1	No alias	myb domain protein 103	0.02	Archaeplastida
Pp3c1_4970V3.1	No alias	myb domain protein 106	0.02	Archaeplastida
Pp3c25_3170V3.1	No alias	myb domain protein 16	0.02	Archaeplastida
Pp3c5_2150V3.1	No alias	myb domain protein 109	0.02	Archaeplastida
Pp3c6_9970V3.1	No alias	myb domain protein 106	0.02	Archaeplastida
Pp3c9_10290V3.1	No alias	myb domain protein 55	0.02	Archaeplastida
Solyc01g094360.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc02g092930.1.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc09g011780.3.1	No alias	transcription factor (MYB)	0.01	Archaeplastida
Solyc11g069030.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc12g005640.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc12g099130.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e010546_P001	No alias	transcription factor (MYB)	0.01	Archaeplastida
Zm00001e010995_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e016583_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e023277_P001	No alias	transcription factor (MYB)	0.01	Archaeplastida
Zm00001e034072_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e041239_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e041535_P001	No alias	no hits & (original description: none)	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000026	alpha-1,2-mannosyltransferase activity	IEP	Neighborhood
MF	GO:0000030	mannosyltransferase activity	IEP	Neighborhood
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Neighborhood
CC	GO:0000791	euchromatin	IEP	Neighborhood
BP	GO:0001763	morphogenesis of a branching structure	IEP	Neighborhood
BP	GO:0002097	tRNA wobble base modification	IEP	Neighborhood
BP	GO:0002098	tRNA wobble uridine modification	IEP	Neighborhood
BP	GO:0002237	response to molecule of bacterial origin	IEP	Neighborhood
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0004376	glycolipid mannosyltransferase activity	IEP	Neighborhood
MF	GO:0004377	GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity	IEP	Neighborhood
MF	GO:0004402	histone acetyltransferase activity	IEP	Neighborhood
MF	GO:0004644	phosphoribosylglycinamide formyltransferase activity	IEP	Neighborhood
CC	GO:0005719	nuclear euchromatin	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Neighborhood
BP	GO:0006400	tRNA modification	IEP	Neighborhood
BP	GO:0006446	regulation of translational initiation	IEP	Neighborhood
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	Neighborhood
BP	GO:0006865	amino acid transport	IEP	Neighborhood
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Neighborhood
MF	GO:0008864	formyltetrahydrofolate deformylase activity	IEP	Neighborhood
BP	GO:0009061	anaerobic respiration	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010084	specification of animal organ axis polarity	IEP	Neighborhood
BP	GO:0010161	red light signaling pathway	IEP	Neighborhood
BP	GO:0010200	response to chitin	IEP	Neighborhood
BP	GO:0010223	secondary shoot formation	IEP	Neighborhood
BP	GO:0010243	response to organonitrogen compound	IEP	Neighborhood
BP	GO:0010346	shoot axis formation	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
MF	GO:0016629	12-oxophytodienoate reductase activity	IEP	Neighborhood
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017025	TBP-class protein binding	IEP	Neighborhood
MF	GO:0019104	DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
BP	GO:0030433	ubiquitin-dependent ERAD pathway	IEP	Neighborhood
CC	GO:0033588	Elongator holoenzyme complex	IEP	Neighborhood
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0035265	organ growth	IEP	Neighborhood
BP	GO:0036503	ERAD pathway	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0042493	response to drug	IEP	Neighborhood
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0070300	phosphatidic acid binding	IEP	Neighborhood
BP	GO:0071491	cellular response to red light	IEP	Neighborhood
BP	GO:0080148	negative regulation of response to water deprivation	IEP	Neighborhood
BP	GO:1900618	regulation of shoot system morphogenesis	IEP	Neighborhood
BP	GO:1901371	regulation of leaf morphogenesis	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	Neighborhood
BP	GO:1905428	regulation of plant organ formation	IEP	Neighborhood
BP	GO:2000024	regulation of leaf development	IEP	Neighborhood
BP	GO:2000025	regulation of leaf formation	IEP	Neighborhood
BP	GO:2000070	regulation of response to water deprivation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	127	173
IPR001005	SANT/Myb	75	121
IPR001005	SANT/Myb	179	222

External Links

No external refs found!

AT5G02320 (ATMYB3R5, MYB3R-5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation