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  5. Pp3c8_250V3.1

Pp3c8_250V3.1


Description : nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding


Gene families : OG0003824 (Archaeplastida) Phylogenetic Tree(s): OG0003824_tree ,
OG_05_0003439 (LandPlants) Phylogenetic Tree(s): OG_05_0003439_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_250V3.1
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00171720 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
GSVIVT01019046001 No alias Chromatin organisation.histone modifications.histone... 0.04 Archaeplastida
Gb_09467 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Gb_27710 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
LOC_Os02g47890.1 No alias Histone-lysine N-methyltransferase SUVR5 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os02g47900.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
MA_10427485g0010 No alias Histone-lysine N-methyltransferase SUVR5 OS=Arabidopsis... 0.03 Archaeplastida
MA_10428046g0010 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
MA_10428226g0010 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Mp7g11940.1 No alias class V/Su(var) histone methyltransferase component of... 0.05 Archaeplastida
Smo123777 No alias Histone-lysine N-methyltransferase SUVR5 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc02g089970.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
Zm00001e023341_P001 No alias class V/Su(var) histone methyltransferase component of... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!