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  5. Pp3c8_3120V3.1

Pp3c8_3120V3.1


Description : decapping 5


Gene families : OG0002072 (Archaeplastida) Phylogenetic Tree(s): OG0002072_tree ,
OG_05_0002133 (LandPlants) Phylogenetic Tree(s): OG_05_0002133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_3120V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00250820 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.02 Archaeplastida
GSVIVT01011971001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.02 Archaeplastida
Gb_24473 No alias regulatory component DCP5 of mRNA decapping complex 0.04 Archaeplastida
Mp7g01960.1 No alias regulatory component DCP5 of mRNA decapping complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!