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  5. Pp3c8_7540V3.1

Pp3c8_7540V3.1


Description : CCAAT-binding factor


Gene families : OG0004672 (Archaeplastida) Phylogenetic Tree(s): OG0004672_tree ,
OG_05_0005887 (LandPlants) Phylogenetic Tree(s): OG_05_0005887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_7540V3.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00013240 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
AT1G72440 EDA25, SWA2 CCAAT-binding factor 0.04 Archaeplastida
Cpa|evm.model.tig00021293.23 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Cre10.g459600 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
LOC_Os09g02810.1 No alias component NOC1 of ribosomal subunit nuclear export complex 0.05 Archaeplastida
MA_295332g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo405981 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Solyc03g123530.4.1 No alias component NOC1 of ribosomal subunit nuclear export complex 0.05 Archaeplastida
Zm00001e000866_P002 No alias component NOC1 of ribosomal subunit nuclear export complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016887 ATPase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!