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  5. Pp3c8_8020V3.1

Pp3c8_8020V3.1


Description : nuclear pore anchor


Gene families : OG0003427 (Archaeplastida) Phylogenetic Tree(s): OG0003427_tree ,
OG_05_0004010 (LandPlants) Phylogenetic Tree(s): OG_05_0004010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_8020V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00124730 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.06 Archaeplastida
AT1G79280 NUA, AtTPR nuclear pore anchor 0.12 Archaeplastida
Cpa|evm.model.tig00000404.46 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 Archaeplastida
GSVIVT01036698001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.16 Archaeplastida
Gb_36757 No alias NUA nucleoporin of nuclear pore complex 0.08 Archaeplastida
LOC_Os02g50790.2 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g50799.1 No alias NUA nucleoporin of nuclear pore complex 0.08 Archaeplastida
MA_10287420g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435343g0040 No alias NUA nucleoporin of nuclear pore complex 0.07 Archaeplastida
MA_109011g0010 No alias NUA nucleoporin of nuclear pore complex 0.06 Archaeplastida
MA_113769g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_125713g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_33097g0010 No alias Nuclear-pore anchor OS=Arabidopsis thaliana... 0.1 Archaeplastida
MA_929786g0010 No alias NUA nucleoporin of nuclear pore complex 0.08 Archaeplastida
Mp2g14600.1 No alias NUA nucleoporin of nuclear pore complex 0.08 Archaeplastida
Smo444132 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.09 Archaeplastida
Solyc06g053570.2.1 No alias NUA nucleoporin of nuclear pore complex 0.16 Archaeplastida
Solyc06g053590.4.1 No alias No annotation 0.05 Archaeplastida
Zm00001e023916_P004 No alias NUA nucleoporin of nuclear pore complex 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!