Description : RNA polymerase II large subunit

Gene families : OG0008468 (Archaeplastida) Phylogenetic Tree(s): OG0008468_tree ,
OG_05_0007457 (LandPlants) Phylogenetic Tree(s): OG_05_0007457_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Pp3c9_12680V3.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_15750V3.1 No alias uracil dna glycosylase 0.04 Archaeplastida
Pp3c19_11510V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c4_1950V3.1 No alias uracil dna glycosylase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007081 RNA_pol_Rpb1_5 240 315
IPR000722 RNA_pol_asu 1 54
IPR005122 Uracil-DNA_glycosylase-like 384 535
IPR007066 RNA_pol_Rpb1_3 60 184
No external refs found!