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  5. AT1G20940

AT1G20940


Description : F-box family protein


Gene families : OG0010148 (Archaeplastida) Phylogenetic Tree(s): OG0010148_tree ,
OG_05_0010201 (LandPlants) Phylogenetic Tree(s): OG_05_0010201_tree ,
OG_06_0009136 (SeedPlants) Phylogenetic Tree(s): OG_06_0009136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G20940
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT1G20290 No alias SWI-SNF-related chromatin binding protein 0.04 Archaeplastida
AT1G20690 No alias SWI-SNF-related chromatin binding protein 0.04 Archaeplastida
AT1G57580 No alias F-box family protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Neighborhood
MF GO:0004029 aldehyde dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004031 aldehyde oxidase activity IEP Neighborhood
MF GO:0004156 dihydropteroate synthase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005355 glucose transmembrane transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008460 dTDP-glucose 4,6-dehydratase activity IEP Neighborhood
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Neighborhood
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
BP GO:0009996 negative regulation of cell fate specification IEP Neighborhood
BP GO:0010061 regulation of trichoblast fate specification IEP Neighborhood
BP GO:0010062 negative regulation of trichoblast fate specification IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP Neighborhood
BP GO:0010453 regulation of cell fate commitment IEP Neighborhood
BP GO:0010454 negative regulation of cell fate commitment IEP Neighborhood
BP GO:0010466 negative regulation of peptidase activity IEP Neighborhood
BP GO:0010496 intercellular transport IEP Neighborhood
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
BP GO:0010951 negative regulation of endopeptidase activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015149 hexose transmembrane transporter activity IEP Neighborhood
MF GO:0015152 glucose-6-phosphate transmembrane transporter activity IEP Neighborhood
BP GO:0015712 hexose phosphate transport IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
BP GO:0016032 viral process IEP Neighborhood
MF GO:0016623 oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0018479 benzaldehyde dehydrogenase (NAD+) activity IEP Neighborhood
MF GO:0018488 aryl-aldehyde oxidase activity IEP Neighborhood
BP GO:0019305 dTDP-rhamnose biosynthetic process IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
BP GO:0030162 regulation of proteolysis IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
BP GO:0042659 regulation of cell fate specification IEP Neighborhood
BP GO:0044000 movement in host IEP Neighborhood
BP GO:0044403 symbiont process IEP Neighborhood
BP GO:0044766 multi-organism transport IEP Neighborhood
MF GO:0045544 gibberellin 20-oxidase activity IEP Neighborhood
BP GO:0045596 negative regulation of cell differentiation IEP Neighborhood
BP GO:0045861 negative regulation of proteolysis IEP Neighborhood
BP GO:0046383 dTDP-rhamnose metabolic process IEP Neighborhood
BP GO:0046653 tetrahydrofolate metabolic process IEP Neighborhood
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Neighborhood
BP GO:0046739 transport of virus in multicellular host IEP Neighborhood
BP GO:0046794 transport of virus IEP Neighborhood
MF GO:0048040 UDP-glucuronate decarboxylase activity IEP Neighborhood
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051346 negative regulation of hydrolase activity IEP Neighborhood
BP GO:0051814 movement in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052126 movement in host environment IEP Neighborhood
BP GO:0052192 movement in environment of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052547 regulation of peptidase activity IEP Neighborhood
BP GO:0052548 regulation of endopeptidase activity IEP Neighborhood
MF GO:0070529 L-tryptophan aminotransferase activity IEP Neighborhood
BP GO:0080022 primary root development IEP Neighborhood
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP Neighborhood
BP GO:1902579 multi-organism localization IEP Neighborhood
BP GO:1903888 regulation of plant epidermal cell differentiation IEP Neighborhood
BP GO:1903889 negative regulation of plant epidermal cell differentiation IEP Neighborhood
BP GO:1905421 regulation of plant organ morphogenesis IEP Neighborhood
BP GO:1905422 negative regulation of plant organ morphogenesis IEP Neighborhood
MF GO:1990135 flavonoid sulfotransferase activity IEP Neighborhood
BP GO:2000067 regulation of root morphogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 16 57
No external refs found!