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  5. AT5G02980

AT5G02980


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0001235 (Archaeplastida) Phylogenetic Tree(s): OG0001235_tree ,
OG_05_0000768 (LandPlants) Phylogenetic Tree(s): OG_05_0000768_tree ,
OG_06_0000384 (SeedPlants) Phylogenetic Tree(s): OG_06_0000384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G02980
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT1G19930 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT1G60570 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT1G61540 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT2G22050 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT2G22060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.04 Archaeplastida
AT2G41360 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT2G44030 No alias Galactose oxidase/kelch repeat superfamily protein 0.1 Archaeplastida
AT2G44630 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT3G08810 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT4G11745 No alias Galactose oxidase/kelch repeat superfamily protein 0.14 Archaeplastida
AT4G11750 No alias Galactose oxidase/kelch repeat superfamily protein 0.1 Archaeplastida
AT4G19250 No alias Galactose oxidase/kelch repeat superfamily protein 0.1 Archaeplastida
AT4G19870 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G29370 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT4G35120 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 Archaeplastida
AT4G39060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.06 Archaeplastida
AT4G39290 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT4G39590 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G39600 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G39750 No alias F-box family protein-related 0.08 Archaeplastida
AT4G39753 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G39760 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 Archaeplastida
AT5G02990 No alias Galactose oxidase/kelch repeat superfamily protein 0.11 Archaeplastida
AT5G02995 No alias No description available 0.07 Archaeplastida
AT5G03000 No alias Galactose oxidase/kelch repeat superfamily protein 0.12 Archaeplastida
AT5G28160 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT5G38670 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida
AT5G39560 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT5G48980 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT5G51250 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004044 amidophosphoribosyltransferase activity IEP Neighborhood
BP GO:0006144 purine nucleobase metabolic process IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009113 purine nucleobase biosynthetic process IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006652 Kelch_1 108 148
IPR006652 Kelch_1 150 183
IPR001810 F-box_dom 13 58
No external refs found!