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  5. Pp3c9_14980V3.1

Pp3c9_14980V3.1


Description : starch synthase 4


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree ,
OG_05_0002023 (LandPlants) Phylogenetic Tree(s): OG_05_0002023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_14980V3.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00214840 evm_27.TU.AmTr_v1... Probable starch synthase 4, chloroplastic/amyloplastic... 0.01 Archaeplastida
AT5G24300 SSI1, ATSS1, SSI Glycogen/starch synthases, ADP-glucose type 0.08 Archaeplastida
GSVIVT01019680001 No alias Carbohydrate metabolism.starch... 0.04 Archaeplastida
Gb_12995 No alias granule-bound starch (amylose) synthase 0.01 Archaeplastida
Gb_13539 No alias Granule-bound starch synthase 1,... 0.03 Archaeplastida
Gb_33234 No alias starch synthase (SSII) 0.02 Archaeplastida
LOC_Os06g04200.3 No alias granule-bound starch (amylose) synthase 0.02 Archaeplastida
LOC_Os06g06560.1 No alias starch synthase (SSI) 0.1 Archaeplastida
LOC_Os06g12450.1 No alias starch synthase (SSII) 0.01 Archaeplastida
LOC_Os08g09230.1 No alias starch synthase (SSIII) 0.01 Archaeplastida
MA_10429460g0010 No alias granule-bound starch (amylose) synthase 0.07 Archaeplastida
MA_10429460g0020 No alias Granule-bound starch synthase 1,... 0.03 Archaeplastida
Mp1g23640.1 No alias granule-bound starch (amylose) synthase 0.05 Archaeplastida
Mp3g25350.1 No alias starch synthase (SSI) 0.04 Archaeplastida
Solyc08g083320.4.1 No alias granule-bound starch (amylose) synthase 0.05 Archaeplastida
Zm00001e027473_P001 No alias starch synthase (SSIV) 0.02 Archaeplastida
Zm00001e030868_P001 No alias starch synthase (SSII) 0.01 Archaeplastida
Zm00001e036589_P003 No alias granule-bound starch (amylose) synthase 0.01 Archaeplastida
Zm00001e039962_P001 No alias starch synthase (SSIII) 0.02 Archaeplastida
Zm00001e041682_P002 No alias starch synthase (SSIII) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 396 572
IPR013534 Starch_synth_cat_dom 103 342
No external refs found!