AT5G03260 (LAC11)

Aliases : LAC11

Description : laccase 11

Gene families : OG0000114 (Archaeplastida) Phylogenetic Tree(s): OG0000114_tree ,
OG_05_0000045 (LandPlants) Phylogenetic Tree(s): OG_05_0000045_tree ,
OG_06_0000178 (SeedPlants) Phylogenetic Tree(s): OG_06_0000178_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G03260
Cluster	HCCA: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00235480	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.10...	0.02	Archaeplastida
AMTR_s00012p00061860	evm_27.TU.AmTr_v1...	Cell wall.lignin.monolignol conjugation and...	0.04	Archaeplastida
AMTR_s00012p00061910	evm_27.TU.AmTr_v1...	Cell wall.lignin.monolignol conjugation and...	0.02	Archaeplastida
AMTR_s00023p00051360	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.10...	0.04	Archaeplastida
AMTR_s00045p00045490	evm_27.TU.AmTr_v1...	Cell wall.lignin.monolignol conjugation and...	0.06	Archaeplastida
AMTR_s00055p00189700	evm_27.TU.AmTr_v1...	Cell wall.lignin.monolignol conjugation and...	0.07	Archaeplastida
AMTR_s00055p00190270	evm_27.TU.AmTr_v1...	Cell wall.lignin.monolignol conjugation and...	0.04	Archaeplastida
AT2G40370	LAC5	laccase 5	0.03	Archaeplastida
AT3G09220	LAC7	laccase 7	0.06	Archaeplastida
AT5G05390	LAC12	laccase 12	0.05	Archaeplastida
GSVIVT01016490001	No alias	Cell wall.lignin.monolignol conjugation and...	0.04	Archaeplastida
GSVIVT01016512001	No alias	Cell wall.lignin.monolignol conjugation and...	0.04	Archaeplastida
GSVIVT01016513001	No alias	Cell wall.lignin.monolignol conjugation and...	0.04	Archaeplastida
GSVIVT01018939001	No alias	Laccase-11 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01024795001	No alias	Cell wall.lignin.monolignol conjugation and...	0.05	Archaeplastida
GSVIVT01025046001	No alias	Cell wall.lignin.monolignol conjugation and...	0.06	Archaeplastida
GSVIVT01025077001	No alias	Cell wall.lignin.monolignol conjugation and...	0.08	Archaeplastida
GSVIVT01032744001	No alias	Laccase-12 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01033501001	No alias	Laccase-11 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01034003001	No alias	Cell wall.lignin.monolignol conjugation and...	0.04	Archaeplastida
GSVIVT01034137001	No alias	Cell wall.lignin.monolignol conjugation and...	0.05	Archaeplastida
GSVIVT01034138001	No alias	Cell wall.lignin.monolignol conjugation and...	0.05	Archaeplastida
GSVIVT01034139001	No alias	Cell wall.lignin.monolignol conjugation and...	0.03	Archaeplastida
GSVIVT01034146001	No alias	Cell wall.lignin.monolignol conjugation and...	0.07	Archaeplastida
Gb_11065	No alias	Laccase-11 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_14613	No alias	lignin laccase	0.03	Archaeplastida
Gb_33400	No alias	Laccase-3 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_34469	No alias	Laccase-12 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os01g44330.1	No alias	Laccase-2 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os01g61160.1	No alias	Laccase-3 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
LOC_Os01g62480.1	No alias	lignin laccase	0.05	Archaeplastida
LOC_Os01g62490.1	No alias	lignin laccase	0.06	Archaeplastida
LOC_Os01g62600.1	No alias	Putative laccase-5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os03g16610.1	No alias	lignin laccase	0.04	Archaeplastida
LOC_Os03g18640.1	No alias	Laccase-5 OS=Arabidopsis thaliana (sp\|q9siy8\|lac5_arath...	0.03	Archaeplastida
LOC_Os05g38420.1	No alias	lignin laccase	0.06	Archaeplastida
LOC_Os11g01730.1	No alias	Putative laccase-17 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os12g01730.1	No alias	Laccase-23 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os12g15920.1	No alias	Laccase-25 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_10428927g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10430789g0010	No alias	Putative laccase-5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_10432961g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_10434084g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_122769g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_132857g0010	No alias	Laccase-12 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_136989g0010	No alias	Laccase-6 OS=Arabidopsis thaliana (sp\|q9zpy2\|lac6_arath...	0.05	Archaeplastida
MA_14240g0010	No alias	Laccase-4 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
MA_185257g0010	No alias	Laccase-12 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_186173g0010	No alias	Laccase-12 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_19643g0010	No alias	Laccase-12 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_28768g0010	No alias	Laccase-4 OS=Arabidopsis thaliana (sp\|o80434\|lac4_arath...	0.04	Archaeplastida
MA_33288g0010	No alias	Laccase-12 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_414479g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_57140g0020	No alias	Laccase-12 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_63042g0010	No alias	Laccase-3 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_66348g0010	No alias	Laccase-12 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_7035458g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_897132g0010	No alias	Laccase-3 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Mp3g20310.1	No alias	Laccase-2 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Pp3c18_3460V3.1	No alias	laccase 12	0.03	Archaeplastida
Smo105894	No alias	Laccase-4 OS=Oryza sativa subsp. japonica	0.04	Archaeplastida
Solyc02g062650.3.1	No alias	Laccase-11 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc02g085110.4.1	No alias	Laccase-11 OS=Arabidopsis thaliana...	0.07	Archaeplastida
Solyc02g085120.3.1	No alias	Laccase-11 OS=Arabidopsis thaliana...	0.06	Archaeplastida
Solyc05g043360.3.1	No alias	Laccase-7 OS=Arabidopsis thaliana (sp\|q9sr40\|lac7_arath...	0.03	Archaeplastida
Solyc05g052340.4.1	No alias	Laccase-5 OS=Arabidopsis thaliana (sp\|q9siy8\|lac5_arath...	0.03	Archaeplastida
Solyc05g052370.3.1	No alias	Laccase-12 OS=Arabidopsis thaliana...	0.09	Archaeplastida
Solyc05g052400.3.1	No alias	Laccase-12 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc06g048860.3.1	No alias	Laccase-5 OS=Arabidopsis thaliana (sp\|q9siy8\|lac5_arath...	0.07	Archaeplastida
Solyc06g076330.3.1	No alias	lignin laccase	0.05	Archaeplastida
Solyc06g076760.2.1	No alias	lignin laccase	0.04	Archaeplastida
Solyc06g082240.2.1	No alias	Laccase-3 OS=Arabidopsis thaliana (sp\|q56yt0\|lac3_arath...	0.06	Archaeplastida
Solyc07g049460.3.1	No alias	Laccase-7 OS=Arabidopsis thaliana (sp\|q9sr40\|lac7_arath...	0.07	Archaeplastida
Solyc09g010990.3.1	No alias	lignin laccase	0.03	Archaeplastida
Solyc09g010995.1.1	No alias	lignin laccase	0.04	Archaeplastida
Solyc09g011960.2.1	No alias	lignin laccase	0.05	Archaeplastida
Solyc09g011970.3.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc09g014240.4.1	No alias	lignin laccase	0.03	Archaeplastida
Solyc09g150105.1.1	No alias	lignin laccase	0.07	Archaeplastida
Solyc10g076830.2.1	No alias	lignin laccase	0.03	Archaeplastida
Solyc10g085090.3.1	No alias	No annotation	0.03	Archaeplastida
Zm00001e001209_P001	No alias	lignin laccase	0.02	Archaeplastida
Zm00001e019303_P001	No alias	lignin laccase	0.03	Archaeplastida
Zm00001e019316_P001	No alias	lignin laccase	0.05	Archaeplastida
Zm00001e019412_P001	No alias	Laccase-3 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Zm00001e023886_P001	No alias	Putative laccase-9 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e023953_P001	No alias	Laccase-23 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Zm00001e028767_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e028830_P002	No alias	Laccase-3 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Zm00001e031826_P001	No alias	lignin laccase	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010413	glucuronoxylan metabolic process	RCA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	RCA	Interproscan
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006491	N-glycan processing	IEP	Neighborhood
BP	GO:0006517	protein deglycosylation	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006816	calcium ion transport	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
BP	GO:0007030	Golgi organization	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
BP	GO:0008361	regulation of cell size	IEP	Neighborhood
MF	GO:0008395	steroid hydroxylase activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0009100	glycoprotein metabolic process	IEP	Neighborhood
BP	GO:0009411	response to UV	IEP	Neighborhood
CC	GO:0009505	plant-type cell wall	IEP	Neighborhood
BP	GO:0009743	response to carbohydrate	IEP	Neighborhood
BP	GO:0009744	response to sucrose	IEP	Neighborhood
BP	GO:0009746	response to hexose	IEP	Neighborhood
BP	GO:0009750	response to fructose	IEP	Neighborhood
BP	GO:0009825	multidimensional cell growth	IEP	Neighborhood
BP	GO:0009826	unidimensional cell growth	IEP	Neighborhood
BP	GO:0009832	plant-type cell wall biogenesis	IEP	Neighborhood
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	Neighborhood
CC	GO:0009897	external side of plasma membrane	IEP	Neighborhood
BP	GO:0009914	hormone transport	IEP	Neighborhood
BP	GO:0009926	auxin polar transport	IEP	Neighborhood
CC	GO:0009930	longitudinal side of cell surface	IEP	Neighborhood
BP	GO:0010015	root morphogenesis	IEP	Neighborhood
BP	GO:0010193	response to ozone	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
BP	GO:0010268	brassinosteroid homeostasis	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
MF	GO:0015089	high-affinity copper ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
BP	GO:0016125	sterol metabolic process	IEP	Neighborhood
BP	GO:0016126	sterol biosynthetic process	IEP	Neighborhood
BP	GO:0016128	phytosteroid metabolic process	IEP	Neighborhood
BP	GO:0016129	phytosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0016131	brassinosteroid metabolic process	IEP	Neighborhood
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
MF	GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	IEP	Neighborhood
BP	GO:0034284	response to monosaccharide	IEP	Neighborhood
BP	GO:0034285	response to disaccharide	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0042546	cell wall biogenesis	IEP	Neighborhood
BP	GO:0042814	monopolar cell growth	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
BP	GO:0043393	regulation of protein binding	IEP	Neighborhood
BP	GO:0043473	pigmentation	IEP	Neighborhood
BP	GO:0043476	pigment accumulation	IEP	Neighborhood
BP	GO:0043478	pigment accumulation in response to UV light	IEP	Neighborhood
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	Neighborhood
BP	GO:0043480	pigment accumulation in tissues	IEP	Neighborhood
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	Neighborhood
BP	GO:0043496	regulation of protein homodimerization activity	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0046658	anchored component of plasma membrane	IEP	Neighborhood
BP	GO:0048441	petal development	IEP	Neighborhood
BP	GO:0048588	developmental cell growth	IEP	Neighborhood
BP	GO:0048589	developmental growth	IEP	Neighborhood
BP	GO:0048767	root hair elongation	IEP	Neighborhood
BP	GO:0051098	regulation of binding	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0055088	lipid homeostasis	IEP	Neighborhood
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Neighborhood
BP	GO:0060918	auxin transport	IEP	Neighborhood
BP	GO:0070838	divalent metal ion transport	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0072511	divalent inorganic cation transport	IEP	Neighborhood
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
CC	GO:0098552	side of membrane	IEP	Neighborhood
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Neighborhood
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Neighborhood
BP	GO:1905392	plant organ morphogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011707	Cu-oxidase_3	32	144
IPR011706	Cu-oxidase_2	407	540
IPR001117	Cu-oxidase	161	307

External Links

No external refs found!

AT5G03260 (LAC11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation