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  5. Pp3c9_3000V3.1

Pp3c9_3000V3.1


Description : sequence-specific DNA binding;sequence-specific DNA binding transcription factors


Gene families : OG0003497 (Archaeplastida) Phylogenetic Tree(s): OG0003497_tree ,
OG_05_0002941 (LandPlants) Phylogenetic Tree(s): OG_05_0002941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_3000V3.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00031700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01011024001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Gb_38590 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_38592 No alias transcription factor (NDX) 0.02 Archaeplastida
LOC_Os05g09630.1 No alias transcription factor (NDX) 0.02 Archaeplastida
MA_917062g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g16560.1 No alias transcription factor (NDX) 0.05 Archaeplastida
Smo446032 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Solyc09g074330.3.1 No alias transcription factor (NDX) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
MF GO:0048365 Rac GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!