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  5. Pp3c9_3120V3.1

Pp3c9_3120V3.1


Description : sensitive to freezing 6


Gene families : OG0006185 (Archaeplastida) Phylogenetic Tree(s): OG0006185_tree ,
OG_05_0006191 (LandPlants) Phylogenetic Tree(s): OG_05_0006191_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_3120V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cre04.g220600 No alias No description available 0.03 Archaeplastida
GSVIVT01002224001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
MA_10435759g0010 No alias component MED16 of tail module of MEDIATOR transcription... 0.03 Archaeplastida
MA_176669g0010 No alias component MED16 of tail module of MEDIATOR transcription... 0.03 Archaeplastida
Solyc02g078520.4.1 No alias component MED16 of tail module of MEDIATOR transcription... 0.03 Archaeplastida
Zm00001e004466_P003 No alias component MED16 of tail module of MEDIATOR transcription... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!