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  5. Pp3c9_3350V3.1

Pp3c9_3350V3.1


Description : basic transcription factor 3


Gene families : OG0001576 (Archaeplastida) Phylogenetic Tree(s): OG0001576_tree ,
OG_05_0001641 (LandPlants) Phylogenetic Tree(s): OG_05_0001641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_3350V3.1
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00143630 evm_27.TU.AmTr_v1... Protein modification.protein folding and quality... 0.06 Archaeplastida
AT1G73230 No alias Nascent polypeptide-associated complex NAC 0.32 Archaeplastida
Cpa|evm.model.tig00021181.13 No alias Protein modification.protein folding and quality... 0.32 Archaeplastida
Cre03.g213537 No alias Protein modification.protein folding and quality... 0.02 Archaeplastida
GSVIVT01029373001 No alias Protein modification.protein folding and quality... 0.13 Archaeplastida
Gb_24863 No alias subunit beta of NAC ribosome-associated chaperone complex 0.06 Archaeplastida
Gb_37281 No alias subunit beta of NAC ribosome-associated chaperone complex 0.14 Archaeplastida
LOC_Os03g01910.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.12 Archaeplastida
LOC_Os03g63400.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.32 Archaeplastida
LOC_Os10g34180.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.23 Archaeplastida
MA_10433493g0010 No alias subunit beta of NAC ribosome-associated chaperone complex 0.04 Archaeplastida
MA_798143g0020 No alias subunit beta of NAC ribosome-associated chaperone complex 0.2 Archaeplastida
Mp1g07270.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.39 Archaeplastida
Pp3c15_17590V3.1 No alias basic transcription factor 3 0.08 Archaeplastida
Smo271374 No alias Protein modification.protein folding and quality... 0.18 Archaeplastida
Solyc07g008720.4.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.08 Archaeplastida
Solyc09g010330.4.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.19 Archaeplastida
Zm00001e000074_P001 No alias subunit beta of NAC ribosome-associated chaperone complex 0.11 Archaeplastida
Zm00001e004545_P001 No alias subunit beta of NAC ribosome-associated chaperone complex 0.22 Archaeplastida
Zm00001e006372_P001 No alias subunit beta of NAC ribosome-associated chaperone complex 0.09 Archaeplastida
Zm00001e012658_P001 No alias subunit beta of NAC ribosome-associated chaperone complex 0.25 Archaeplastida
Zm00001e039092_P001 No alias subunit beta of NAC ribosome-associated chaperone complex 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002715 Nas_poly-pep-assoc_cplx_dom 36 90
No external refs found!