Pp3c9_4960V3.1


Description : PNAS-3 related


Gene families : OG0005639 (Archaeplastida) Phylogenetic Tree(s): OG0005639_tree ,
OG_05_0006509 (LandPlants) Phylogenetic Tree(s): OG_05_0006509_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_4960V3.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT2G25355 No alias PNAS-3 related 0.06 Archaeplastida
Cre07.g319900 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.06 Archaeplastida
LOC_Os01g47256.4 No alias component RRP40 of exosome EXO9 core complex 0.02 Archaeplastida
MA_473706g0010 No alias component RRP40 of exosome EXO9 core complex 0.02 Archaeplastida
Mp1g16490.1 No alias component RRP40 of exosome EXO9 core complex 0.02 Archaeplastida
Solyc06g071460.3.1 No alias component RRP40 of exosome EXO9 core complex 0.04 Archaeplastida
Zm00001e020254_P001 No alias component RRP40 of exosome EXO9 core complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0005666 RNA polymerase III complex IEP Neighborhood
BP GO:0006383 transcription by RNA polymerase III IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!