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  5. Pp3c9_6410V3.1

Pp3c9_6410V3.1


Description : like heterochromatin protein (LHP1)


Gene families : OG0004237 (Archaeplastida) Phylogenetic Tree(s): OG0004237_tree ,
OG_05_0004391 (LandPlants) Phylogenetic Tree(s): OG_05_0004391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_6410V3.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT5G17690 TFL2, LHP1 like heterochromatin protein (LHP1) 0.02 Archaeplastida
GSVIVT01019328001 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
LOC_Os10g17770.1 No alias modification reader component Pc of PRC1 histone... 0.02 Archaeplastida
Mp7g13420.1 No alias modification reader component Pc of PRC1 histone... 0.03 Archaeplastida
Solyc10g024470.3.1 No alias modification reader component Pc of PRC1 histone... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!