Pp3s121_40V3.1

Description : RNAhelicase-like 8

Gene families : OG0002759 (Archaeplastida) Phylogenetic Tree(s): OG0002759_tree ,
OG_05_0002600 (LandPlants) Phylogenetic Tree(s): OG_05_0002600_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3s121_40V3.1
Cluster	HCCA: Cluster_270

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os02g42860.1	No alias	DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa...	0.02	Archaeplastida
LOC_Os04g45040.3	No alias	DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	99	262
IPR001650	Helicase_C	300	406

External Links

No external refs found!