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  5. Pp3s152_10V3.1

Pp3s152_10V3.1


Description : SC35-like splicing factor 30A


Gene families : OG0001329 (Archaeplastida) Phylogenetic Tree(s): OG0001329_tree ,
OG_05_0001146 (LandPlants) Phylogenetic Tree(s): OG_05_0001146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3s152_10V3.1
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00135100 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
AT3G55460 SCL30, At-SCL30 SC35-like splicing factor 30 0.02 Archaeplastida
LOC_Os02g15310.1 No alias SCL28/30/33 RNA splicing factor 0.04 Archaeplastida
MA_89588g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g01880.1 No alias SCL28/30/33 RNA splicing factor 0.03 Archaeplastida
Zm00001e035636_P001 No alias SCL28/30/33 RNA splicing factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!