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  5. Pp3s62_90V3.1

Pp3s62_90V3.1


Description : PIF1 helicase


Gene families : OG0008683 (Archaeplastida) Phylogenetic Tree(s): OG0008683_tree ,
OG_05_0008092 (LandPlants) Phylogenetic Tree(s): OG_05_0008092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3s62_90V3.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Pp3c13_15770V3.1 No alias PIF1 helicase 0.04 Archaeplastida
Pp3c14_7910V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c15_9490V3.1 No alias PIF1 helicase 0.05 Archaeplastida
Pp3c15_9500V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c17_18600V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c17_18610V3.1 No alias PIF1 helicase 0.03 Archaeplastida
Pp3c17_6950V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c22_19090V3.1 No alias No annotation 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA Interproscan
MF GO:0003678 DNA helicase activity IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 439 547
No external refs found!