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Aliases : PKS4
Description : phytochrome kinase substrate 4
Gene families : OG0010080 (Archaeplastida) Phylogenetic Tree(s): OG0010080_tree ,
OG_05_0010107 (LandPlants) Phylogenetic Tree(s): OG_05_0010107_tree ,
OG_06_0008545 (SeedPlants) Phylogenetic Tree(s): OG_06_0008545_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G04190 | |
| Cluster | HCCA: Cluster_249 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| MA_80954g0010 | No alias | phototropin signalling factor (PKS) | 0.05 | Archaeplastida | |
| MA_80954g0020 | No alias | phototropin signalling factor (PKS) | 0.03 | Archaeplastida | |
| Solyc10g081340.1.1 | No alias | phototropin signalling factor (PKS) | 0.09 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005886 | plasma membrane | ISM | Interproscan |
| BP | GO:0009638 | phototropism | IGI | Interproscan |
| BP | GO:0010017 | red or far-red light signaling pathway | IMP | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000322 | storage vacuole | IEP | Neighborhood |
| CC | GO:0000326 | protein storage vacuole | IEP | Neighborhood |
| BP | GO:0000578 | embryonic axis specification | IEP | Neighborhood |
| BP | GO:0000902 | cell morphogenesis | IEP | Neighborhood |
| BP | GO:0002832 | negative regulation of response to biotic stimulus | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0005275 | amine transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005372 | water transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006783 | heme biosynthetic process | IEP | Neighborhood |
| BP | GO:0006816 | calcium ion transport | IEP | Neighborhood |
| BP | GO:0006833 | water transport | IEP | Neighborhood |
| BP | GO:0006869 | lipid transport | IEP | Neighborhood |
| BP | GO:0006873 | cellular ion homeostasis | IEP | Neighborhood |
| BP | GO:0007030 | Golgi organization | IEP | Neighborhood |
| MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
| MF | GO:0008146 | sulfotransferase activity | IEP | Neighborhood |
| BP | GO:0008156 | negative regulation of DNA replication | IEP | Neighborhood |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0008356 | asymmetric cell division | IEP | Neighborhood |
| BP | GO:0008361 | regulation of cell size | IEP | Neighborhood |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009299 | mRNA transcription | IEP | Neighborhood |
| BP | GO:0009629 | response to gravity | IEP | Neighborhood |
| BP | GO:0009630 | gravitropism | IEP | Neighborhood |
| BP | GO:0009641 | shade avoidance | IEP | Neighborhood |
| MF | GO:0009672 | auxin:proton symporter activity | IEP | Neighborhood |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
| BP | GO:0009725 | response to hormone | IEP | Neighborhood |
| BP | GO:0009733 | response to auxin | IEP | Neighborhood |
| BP | GO:0009736 | cytokinin-activated signaling pathway | IEP | Neighborhood |
| BP | GO:0009740 | gibberellic acid mediated signaling pathway | IEP | Neighborhood |
| BP | GO:0009741 | response to brassinosteroid | IEP | Neighborhood |
| BP | GO:0009755 | hormone-mediated signaling pathway | IEP | Neighborhood |
| BP | GO:0009798 | axis specification | IEP | Neighborhood |
| BP | GO:0009825 | multidimensional cell growth | IEP | Neighborhood |
| BP | GO:0009826 | unidimensional cell growth | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009896 | positive regulation of catabolic process | IEP | Neighborhood |
| BP | GO:0009914 | hormone transport | IEP | Neighborhood |
| BP | GO:0009926 | auxin polar transport | IEP | Neighborhood |
| BP | GO:0009942 | longitudinal axis specification | IEP | Neighborhood |
| BP | GO:0009958 | positive gravitropism | IEP | Neighborhood |
| BP | GO:0009959 | negative gravitropism | IEP | Neighborhood |
| CC | GO:0009986 | cell surface | IEP | Neighborhood |
| BP | GO:0010015 | root morphogenesis | IEP | Neighborhood |
| BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
| BP | GO:0010082 | regulation of root meristem growth | IEP | Neighborhood |
| BP | GO:0010099 | regulation of photomorphogenesis | IEP | Neighborhood |
| BP | GO:0010100 | negative regulation of photomorphogenesis | IEP | Neighborhood |
| BP | GO:0010155 | regulation of proton transport | IEP | Neighborhood |
| BP | GO:0010161 | red light signaling pathway | IEP | Neighborhood |
| BP | GO:0010162 | seed dormancy process | IEP | Neighborhood |
| BP | GO:0010187 | negative regulation of seed germination | IEP | Neighborhood |
| MF | GO:0010313 | phytochrome binding | IEP | Neighborhood |
| BP | GO:0010315 | auxin efflux | IEP | Neighborhood |
| MF | GO:0010329 | auxin efflux transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010476 | gibberellin mediated signaling pathway | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010583 | response to cyclopentenone | IEP | Neighborhood |
| BP | GO:0010928 | regulation of auxin mediated signaling pathway | IEP | Neighborhood |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | Neighborhood |
| CC | GO:0012506 | vesicle membrane | IEP | Neighborhood |
| BP | GO:0014070 | response to organic cyclic compound | IEP | Neighborhood |
| MF | GO:0015101 | organic cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015200 | methylammonium transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015204 | urea transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015250 | water channel activity | IEP | Neighborhood |
| MF | GO:0015267 | channel activity | IEP | Neighborhood |
| MF | GO:0015293 | symporter activity | IEP | Neighborhood |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Neighborhood |
| MF | GO:0015295 | solute:proton symporter activity | IEP | Neighborhood |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015562 | efflux transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015669 | gas transport | IEP | Neighborhood |
| BP | GO:0015670 | carbon dioxide transport | IEP | Neighborhood |
| BP | GO:0015840 | urea transport | IEP | Neighborhood |
| BP | GO:0016049 | cell growth | IEP | Neighborhood |
| CC | GO:0016328 | lateral plasma membrane | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0019755 | one-carbon compound transport | IEP | Neighborhood |
| BP | GO:0022611 | dormancy process | IEP | Neighborhood |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
| BP | GO:0030003 | cellular cation homeostasis | IEP | Neighborhood |
| BP | GO:0030162 | regulation of proteolysis | IEP | Neighborhood |
| BP | GO:0030308 | negative regulation of cell growth | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0031329 | regulation of cellular catabolic process | IEP | Neighborhood |
| BP | GO:0031331 | positive regulation of cellular catabolic process | IEP | Neighborhood |
| BP | GO:0032102 | negative regulation of response to external stimulus | IEP | Neighborhood |
| BP | GO:0032434 | regulation of proteasomal ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:0032502 | developmental process | IEP | Neighborhood |
| BP | GO:0032535 | regulation of cellular component size | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0032875 | regulation of DNA endoreduplication | IEP | Neighborhood |
| BP | GO:0032876 | negative regulation of DNA endoreduplication | IEP | Neighborhood |
| BP | GO:0032879 | regulation of localization | IEP | Neighborhood |
| BP | GO:0032989 | cellular component morphogenesis | IEP | Neighborhood |
| BP | GO:0033993 | response to lipid | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0034762 | regulation of transmembrane transport | IEP | Neighborhood |
| BP | GO:0034765 | regulation of ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0040007 | growth | IEP | Neighborhood |
| BP | GO:0042044 | fluid transport | IEP | Neighborhood |
| BP | GO:0042168 | heme metabolic process | IEP | Neighborhood |
| BP | GO:0042176 | regulation of protein catabolic process | IEP | Neighborhood |
| BP | GO:0042221 | response to chemical | IEP | Neighborhood |
| CC | GO:0042807 | central vacuole | IEP | Neighborhood |
| BP | GO:0043269 | regulation of ion transport | IEP | Neighborhood |
| MF | GO:0043425 | bHLH transcription factor binding | IEP | Neighborhood |
| BP | GO:0043473 | pigmentation | IEP | Neighborhood |
| BP | GO:0043476 | pigment accumulation | IEP | Neighborhood |
| BP | GO:0043478 | pigment accumulation in response to UV light | IEP | Neighborhood |
| BP | GO:0043479 | pigment accumulation in tissues in response to UV light | IEP | Neighborhood |
| BP | GO:0043480 | pigment accumulation in tissues | IEP | Neighborhood |
| BP | GO:0043481 | anthocyanin accumulation in tissues in response to UV light | IEP | Neighborhood |
| BP | GO:0043901 | negative regulation of multi-organism process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0045732 | positive regulation of protein catabolic process | IEP | Neighborhood |
| BP | GO:0045862 | positive regulation of proteolysis | IEP | Neighborhood |
| BP | GO:0045926 | negative regulation of growth | IEP | Neighborhood |
| BP | GO:0046777 | protein autophosphorylation | IEP | Neighborhood |
| MF | GO:0047807 | cytokinin 7-beta-glucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0048588 | developmental cell growth | IEP | Neighborhood |
| BP | GO:0048589 | developmental growth | IEP | Neighborhood |
| BP | GO:0048609 | multicellular organismal reproductive process | IEP | Neighborhood |
| BP | GO:0048766 | root hair initiation | IEP | Neighborhood |
| BP | GO:0048767 | root hair elongation | IEP | Neighborhood |
| BP | GO:0051049 | regulation of transport | IEP | Neighborhood |
| BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051239 | regulation of multicellular organismal process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0060560 | developmental growth involved in morphogenesis | IEP | Neighborhood |
| BP | GO:0060918 | auxin transport | IEP | Neighborhood |
| BP | GO:0061136 | regulation of proteasomal protein catabolic process | IEP | Neighborhood |
| BP | GO:0065008 | regulation of biological quality | IEP | Neighborhood |
| BP | GO:0070838 | divalent metal ion transport | IEP | Neighborhood |
| BP | GO:0071491 | cellular response to red light | IEP | Neighborhood |
| BP | GO:0072511 | divalent inorganic cation transport | IEP | Neighborhood |
| MF | GO:0080062 | cytokinin 9-beta-glucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0080086 | stamen filament development | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0080161 | auxin transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0090066 | regulation of anatomical structure size | IEP | Neighborhood |
| BP | GO:0090329 | regulation of DNA-dependent DNA replication | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1900424 | regulation of defense response to bacterium | IEP | Neighborhood |
| BP | GO:1900425 | negative regulation of defense response to bacterium | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901483 | regulation of transcription factor catabolic process | IEP | Neighborhood |
| BP | GO:1901485 | positive regulation of transcription factor catabolic process | IEP | Neighborhood |
| BP | GO:1901800 | positive regulation of proteasomal protein catabolic process | IEP | Neighborhood |
| BP | GO:1903050 | regulation of proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
| BP | GO:1903052 | positive regulation of proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
| BP | GO:1903362 | regulation of cellular protein catabolic process | IEP | Neighborhood |
| BP | GO:1903364 | positive regulation of cellular protein catabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1904062 | regulation of cation transmembrane transport | IEP | Neighborhood |
| BP | GO:2000026 | regulation of multicellular organismal development | IEP | Neighborhood |
| BP | GO:2000038 | regulation of stomatal complex development | IEP | Neighborhood |
| BP | GO:2000058 | regulation of ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:2000060 | positive regulation of ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:2000104 | negative regulation of DNA-dependent DNA replication | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |