AT5G05330


Description : HMG-box (high mobility group) DNA-binding family protein


Gene families : OG0000591 (Archaeplastida) Phylogenetic Tree(s): OG0000591_tree ,
OG_05_0047241 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0041998 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G05330

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000553.19 No alias FACT complex subunit SSRP1 OS=Vicia faba 0.02 Archaeplastida
Cpa|evm.model.tig00000984.29 No alias No description available 0.02 Archaeplastida
Gb_32435 No alias High mobility group B protein 7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c17_7580V3.1 No alias high mobility group B3 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0007020 microtubule nucleation IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0010050 vegetative phase change IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!