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  5. MA_10148529g0010

MA_10148529g0010


Description : NDC1 nucleoporin of nuclear pore complex


Gene families : OG0006719 (Archaeplastida) Phylogenetic Tree(s): OG0006719_tree ,
OG_05_0006560 (LandPlants) Phylogenetic Tree(s): OG_05_0006560_tree ,
OG_06_0006755 (SeedPlants) Phylogenetic Tree(s): OG_06_0006755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10148529g0010
Cluster HCCA: Cluster_530

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01969p00005930 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Cre03.g197550 No alias No description available 0.01 Archaeplastida
Mp1g24000.1 No alias NDC1 nucleoporin of nuclear pore complex 0.02 Archaeplastida
Pp3c23_16320V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR019049 Nucleoporin_prot_Ndc1/Nup 44 167
No external refs found!