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Description : RNA-binding protein
Gene families : OG0011542 (Archaeplastida) Phylogenetic Tree(s): OG0011542_tree ,
OG_05_0011444 (LandPlants) Phylogenetic Tree(s): OG_05_0011444_tree ,
OG_06_0011550 (SeedPlants) Phylogenetic Tree(s): OG_06_0011550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G05430 | |
| Cluster | HCCA: Cluster_111 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G72800 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Neighborhood |
| BP | GO:0000412 | histone peptidyl-prolyl isomerization | IEP | Neighborhood |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Neighborhood |
| MF | GO:0004793 | threonine aldolase activity | IEP | Neighborhood |
| MF | GO:0005372 | water transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005527 | macrolide binding | IEP | Neighborhood |
| MF | GO:0005528 | FK506 binding | IEP | Neighborhood |
| CC | GO:0005576 | extracellular region | IEP | Neighborhood |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Neighborhood |
| BP | GO:0006566 | threonine metabolic process | IEP | Neighborhood |
| BP | GO:0006567 | threonine catabolic process | IEP | Neighborhood |
| MF | GO:0008028 | monocarboxylic acid transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0009061 | anaerobic respiration | IEP | Neighborhood |
| BP | GO:0009068 | aspartate family amino acid catabolic process | IEP | Neighborhood |
| BP | GO:0009704 | de-etiolation | IEP | Neighborhood |
| BP | GO:0010017 | red or far-red light signaling pathway | IEP | Neighborhood |
| MF | GO:0010296 | prenylcysteine methylesterase activity | IEP | Neighborhood |
| MF | GO:0015129 | lactate transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015250 | water channel activity | IEP | Neighborhood |
| BP | GO:0015718 | monocarboxylic acid transport | IEP | Neighborhood |
| BP | GO:0015727 | lactate transport | IEP | Neighborhood |
| BP | GO:0015850 | organic hydroxy compound transport | IEP | Neighborhood |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Neighborhood |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Neighborhood |
| BP | GO:0031537 | regulation of anthocyanin metabolic process | IEP | Neighborhood |
| BP | GO:0031539 | positive regulation of anthocyanin metabolic process | IEP | Neighborhood |
| BP | GO:0048445 | carpel morphogenesis | IEP | Neighborhood |
| MF | GO:0051723 | protein methylesterase activity | IEP | Neighborhood |
| BP | GO:0071489 | cellular response to red or far red light | IEP | Neighborhood |
| MF | GO:1901618 | organic hydroxy compound transmembrane transporter activity | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |