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  5. MA_10151143g0010

MA_10151143g0010


Description : histone (H2B)


Gene families : OG0000186 (Archaeplastida) Phylogenetic Tree(s): OG0000186_tree ,
OG_05_0000249 (LandPlants) Phylogenetic Tree(s): OG_05_0000249_tree ,
OG_06_0000187 (SeedPlants) Phylogenetic Tree(s): OG_06_0000187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10151143g0010
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT3G46030 HTB11 Histone superfamily protein 0.02 Archaeplastida
Cre06.g264900 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre06.g271376 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre06.g274250 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre06.g275800 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre06.g276550 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre06.g276900 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre12.g504700 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre12.g505600 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre12.g506200 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre13.g570050 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre17.g709150 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre17.g710450 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre17.g711750 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre17.g714050 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Gb_02245 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os03g17084.1 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os05g49860.1 No alias histone (H2B) 0.02 Archaeplastida
MA_10428006g0010 No alias histone (H2B) 0.02 Archaeplastida
Mp6g04070.1 No alias histone (H2B) 0.02 Archaeplastida
Pp3c12_7610V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c13_23540V3.1 No alias Histone superfamily protein 0.03 Archaeplastida
Smo182308 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Solyc05g055440.1.1 No alias histone (H2B) 0.02 Archaeplastida
Solyc06g074780.1.1 No alias histone (H2B) 0.02 Archaeplastida
Zm00001e010906_P002 No alias histone (H2B) 0.02 Archaeplastida
Zm00001e016882_P001 No alias histone (H2B) 0.04 Archaeplastida
Zm00001e023342_P001 No alias histone (H2B) 0.02 Archaeplastida
Zm00001e038466_P001 No alias histone (H2B) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 42
No external refs found!