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  5. MA_10168585g0010

MA_10168585g0010


Description : platform ATPase (CDC48)


Gene families : OG0000169 (Archaeplastida) Phylogenetic Tree(s): OG0000169_tree ,
OG_05_0001221 (LandPlants) Phylogenetic Tree(s): OG_05_0001221_tree ,
OG_06_0001614 (SeedPlants) Phylogenetic Tree(s): OG_06_0001614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10168585g0010
Cluster HCCA: Cluster_500

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00117380 evm_27.TU.AmTr_v1... Cell division control protein 48 homolog D... 0.02 Archaeplastida
GSVIVT01007689001 No alias Cell division cycle protein 48 homolog OS=Glycine max 0.02 Archaeplastida
GSVIVT01025723001 No alias Cell division control protein 48 homolog D... 0.04 Archaeplastida
LOC_Os03g05730.1 No alias platform ATPase (CDC48) 0.04 Archaeplastida
LOC_Os08g44240.1 No alias component Pex1 of Pex1-Pex6 subcomplex 0.02 Archaeplastida
LOC_Os10g30580.1 No alias platform ATPase (CDC48) 0.03 Archaeplastida
Mp1g02450.1 No alias platform ATPase (CDC48) 0.02 Archaeplastida
Pp3c4_26860V3.1 No alias ATPase, AAA-type, CDC48 protein 0.03 Archaeplastida
Solyc01g068330.4.1 No alias Cell division control protein 48 homolog C... 0.02 Archaeplastida
Zm00001e007076_P001 No alias component Pex6 of Pex1-Pex6 subcomplex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 101 230
IPR003959 ATPase_AAA_core 374 507
IPR004201 Cdc48_dom2 5 51
No external refs found!