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  5. MA_101720g0010

MA_101720g0010


Description : pectin methylesterase


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0005471 (LandPlants) Phylogenetic Tree(s): OG_05_0005471_tree ,
OG_06_0005924 (SeedPlants) Phylogenetic Tree(s): OG_06_0005924_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_101720g0010

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014641001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 Archaeplastida
Pp3c3_35040V3.1 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
Pp3c8_1680V3.1 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 6 299
No external refs found!