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  5. MA_10197194g0010

MA_10197194g0010


Description : no hits & (original description: none)


Gene families : OG0000897 (Archaeplastida) Phylogenetic Tree(s): OG0000897_tree ,
OG_05_0001976 (LandPlants) Phylogenetic Tree(s): OG_05_0001976_tree ,
OG_06_0002181 (SeedPlants) Phylogenetic Tree(s): OG_06_0002181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10197194g0010
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00210830 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00080p00099010 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT3G54760 No alias dentin sialophosphoprotein-related 0.04 Archaeplastida
AT5G27650 No alias Tudor/PWWP/MBT superfamily protein 0.05 Archaeplastida
AT5G40340 No alias Tudor/PWWP/MBT superfamily protein 0.06 Archaeplastida
Cre06.g270700 No alias No description available 0.02 Archaeplastida
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01031118001 No alias No description available 0.07 Archaeplastida
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_40891 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os05g38800.2 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g38810.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g19810.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10434021g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc01g099360.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g086750.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc04g049950.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g007340.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027258_P002 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e031849_P002 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000313 PWWP_dom 771 857
No external refs found!