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  5. MA_101972g0010

MA_101972g0010


Description : transcription factor (zf-HD)


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_101972g0010
Cluster HCCA: Cluster_518

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00119p00074870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT1G69600 ATHB29, ZFHD1, ZHD11 zinc finger homeodomain 1 0.03 Archaeplastida
AT1G74660 MIF1 mini zinc finger 1 0.03 Archaeplastida
AT3G28917 MIF2 mini zinc finger 2 0.02 Archaeplastida
AT3G28920 HB34, ZHD9, AtHB34 homeobox protein 34 0.03 Archaeplastida
AT3G50890 ZHD7, HB28, AtHB28 homeobox protein 28 0.03 Archaeplastida
AT5G15210 ZHD8, ATHB30, ZFHD3, HB30 homeobox protein 30 0.03 Archaeplastida
AT5G39760 ZHD10, AtHB23, HB23 homeobox protein 23 0.04 Archaeplastida
GSVIVT01018947001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_37393 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os03g50920.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os09g24810.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
LOC_Os09g24820.1 No alias transcription factor (zf-HD) 0.08 Archaeplastida
LOC_Os12g03110.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_470326g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c18_12880V3.1 No alias homeobox protein 31 0.04 Archaeplastida
Pp3c21_11010V3.1 No alias homeobox protein 22 0.04 Archaeplastida
Pp3c2_21160V3.1 No alias homeobox protein 33 0.02 Archaeplastida
Pp3c7_15000V3.1 No alias homeobox protein 33 0.03 Archaeplastida
Solyc01g102980.3.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
Solyc02g085160.1.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Solyc03g116070.1.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Solyc04g080490.4.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Zm00001e009830_P001 No alias transcription factor (zf-HD) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 124 176
No external refs found!