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  5. MA_102181g0010

MA_102181g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 574.0)


Gene families : OG0016348 (Archaeplastida) Phylogenetic Tree(s): OG0016348_tree ,
OG_05_0018260 (LandPlants) Phylogenetic Tree(s): OG_05_0018260_tree ,
OG_06_0006275 (SeedPlants) Phylogenetic Tree(s): OG_06_0006275_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_102181g0010
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Gb_27282 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Solyc12g011400.3.1 No alias Pentatricopeptide repeat-containing protein At1g53600,... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 390 438
IPR002885 Pentatricopeptide_repeat 35 68
IPR002885 Pentatricopeptide_repeat 159 207
IPR002885 Pentatricopeptide_repeat 289 336
IPR002885 Pentatricopeptide_repeat 4 32
IPR002885 Pentatricopeptide_repeat 464 488
IPR002885 Pentatricopeptide_repeat 69 98
IPR002885 Pentatricopeptide_repeat 229 258
IPR002885 Pentatricopeptide_repeat 100 130
IPR002885 Pentatricopeptide_repeat 260 287
No external refs found!