MA_10243490g0010

Description : Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana (sp|q0wpz6|pp158_arath : 642.0)

Gene families : OG0009700 (Archaeplastida) Phylogenetic Tree(s): OG0009700_tree ,
OG_05_0009739 (LandPlants) Phylogenetic Tree(s): OG_05_0009739_tree ,
OG_06_0007391 (SeedPlants) Phylogenetic Tree(s): OG_06_0007391_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10243490g0010
Cluster	HCCA: Cluster_530

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_06597	No alias	Pentatricopeptide repeat-containing protein At2g17140...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0016255	attachment of GPI anchor to protein	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
CC	GO:0042765	GPI-anchor transamidase complex	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	751	781
IPR002885	Pentatricopeptide_repeat	103	125
IPR002885	Pentatricopeptide_repeat	717	746
IPR002885	Pentatricopeptide_repeat	302	333
IPR002885	Pentatricopeptide_repeat	337	367
IPR002885	Pentatricopeptide_repeat	194	227
IPR002885	Pentatricopeptide_repeat	675	706
IPR002885	Pentatricopeptide_repeat	374	423
IPR002885	Pentatricopeptide_repeat	539	588
IPR002885	Pentatricopeptide_repeat	233	282
IPR002885	Pentatricopeptide_repeat	131	177
IPR002885	Pentatricopeptide_repeat	612	657
IPR002885	Pentatricopeptide_repeat	445	493

External Links

No external refs found!