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  5. MA_10260361g0010

MA_10260361g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0009289 (SeedPlants) Phylogenetic Tree(s): OG_06_0009289_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10260361g0010
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G49210 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G17905 ATL4H RING/U-box superfamily protein 0.04 Archaeplastida
AT5G17600 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g34550.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_132693g0010 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
MA_8556123g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_8710804g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Pp3c14_14600V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo443606 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo448587 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Solyc02g087040.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc04g014220.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc06g007230.2.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc09g089890.1.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e014832_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e037107_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 143 186
No external refs found!