- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Pathogenesis-related protein PR-1 OS=Medicago truncatula (sp|q40374|pr1_medtr : 176.0)
Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0000056 (LandPlants) Phylogenetic Tree(s): OG_05_0000056_tree ,
OG_06_0000073 (SeedPlants) Phylogenetic Tree(s): OG_06_0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_102795g0010 | |
| Cluster | HCCA: Cluster_131 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00199580 | evm_27.TU.AmTr_v1... | Pathogenesis-related protein PR-1 OS=Medicago truncatula | 0.02 | Archaeplastida | |
| AMTR_s00019p00199860 | evm_27.TU.AmTr_v1... | Pathogenesis-related protein PR-1 OS=Medicago truncatula | 0.04 | Archaeplastida | |
| AMTR_s00019p00200490 | evm_27.TU.AmTr_v1... | Pathogenesis-related protein PR-1 OS=Medicago truncatula | 0.02 | Archaeplastida | |
| AMTR_s00019p00250630 | evm_27.TU.AmTr_v1... | Pathogenesis-related protein PR-1 type OS=Sambucus nigra | 0.03 | Archaeplastida | |
| AMTR_s00059p00174680 | evm_27.TU.AmTr_v1... | STS14 protein OS=Solanum tuberosum | 0.04 | Archaeplastida | |
| AT2G14610 | ATPR1, PR1, PR 1 | pathogenesis-related gene 1 | 0.04 | Archaeplastida | |
| AT4G33710 | No alias | CAP (Cysteine-rich secretory proteins, Antigen 5, and... | 0.04 | Archaeplastida | |
| AT4G33720 | No alias | CAP (Cysteine-rich secretory proteins, Antigen 5, and... | 0.04 | Archaeplastida | |
| GSVIVT01037000001 | No alias | Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum | 0.03 | Archaeplastida | |
| GSVIVT01037015001 | No alias | Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum | 0.05 | Archaeplastida | |
| LOC_Os07g03279.1 | No alias | Basic form of pathogenesis-related protein 1... | 0.05 | Archaeplastida | |
| LOC_Os07g03368.1 | No alias | Basic form of pathogenesis-related protein 1... | 0.02 | Archaeplastida | |
| LOC_Os07g03458.1 | No alias | Basic form of pathogenesis-related protein 1... | 0.05 | Archaeplastida | |
| LOC_Os07g03580.1 | No alias | Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... | 0.03 | Archaeplastida | |
| MA_501572g0010 | No alias | Basic form of pathogenesis-related protein 1... | 0.03 | Archaeplastida | |
| Mp2g05480.1 | No alias | Basic form of pathogenesis-related protein 1... | 0.02 | Archaeplastida | |
| Mp3g14110.1 | No alias | Pathogenesis-related protein 1 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| Mp3g14130.1 | No alias | Pathogenesis-related protein 1 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Mp4g16750.1 | No alias | Pathogenesis-related protein 1 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Mp6g06330.1 | No alias | Pathogenesis-related protein 1C OS=Nicotiana tabacum... | 0.02 | Archaeplastida | |
| Mp6g06360.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Mpzg00750.1 | No alias | Pathogenesis-related protein 1 OS=Hordeum vulgare... | 0.03 | Archaeplastida | |
| Mpzg00760.1 | No alias | Pathogenesis-related protein 1 OS=Hordeum vulgare... | 0.03 | Archaeplastida | |
| Mpzg00770.1 | No alias | Pathogenesis-related protein 1C OS=Nicotiana tabacum... | 0.03 | Archaeplastida | |
| Pp3c17_17400V3.1 | No alias | CAP (Cysteine-rich secretory proteins, Antigen 5, and... | 0.02 | Archaeplastida | |
| Pp3c25_120V3.1 | No alias | CAP (Cysteine-rich secretory proteins, Antigen 5, and... | 0.03 | Archaeplastida | |
| Smo101466 | No alias | Pathogenesis-related protein 1C OS=Nicotiana tabacum | 0.04 | Archaeplastida | |
| Smo76987 | No alias | Pathogenesis-related protein PR-1 type OS=Sambucus nigra | 0.03 | Archaeplastida | |
| Zm00001e002028_P001 | No alias | Pathogenesis-related protein PRMS OS=Zea mays... | 0.02 | Archaeplastida | |
| Zm00001e016075_P001 | No alias | Pathogenesis-related protein 1 OS=Hordeum vulgare... | 0.02 | Archaeplastida | |
| Zm00001e032757_P001 | No alias | Pathogenesis-related protein PRMS OS=Zea mays... | 0.02 | Archaeplastida | |
| Zm00001e033272_P001 | No alias | Pathogenesis-related protein PRMS OS=Zea mays... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001101 | response to acid chemical | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003993 | acid phosphatase activity | IEP | Neighborhood |
| MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006811 | ion transport | IEP | Neighborhood |
| BP | GO:0006820 | anion transport | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010035 | response to inorganic substance | IEP | Neighborhood |
| BP | GO:0010167 | response to nitrate | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
| BP | GO:0015698 | inorganic anion transport | IEP | Neighborhood |
| BP | GO:0015706 | nitrate transport | IEP | Neighborhood |
| MF | GO:0016791 | phosphatase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
| MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
| MF | GO:0022839 | ion gated channel activity | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1901698 | response to nitrogen compound | IEP | Neighborhood |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR014044 | CAP_domain | 48 | 163 |
| No external refs found! |