MA_10297274g0010

Description : Putative disease resistance protein RGA4 OS=Solanum bulbocastanum (sp|q7xa39|rga4_solbu : 255.0)

Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000258 (SeedPlants) Phylogenetic Tree(s): OG_06_0000258_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10297274g0010
Cluster	HCCA: Cluster_293

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00263750	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00006p00263900	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00039p00121770	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AMTR_s00061p00205330	evm_27.TU.AmTr_v1...	Probable disease resistance RPP8-like protein 2...	0.02	Archaeplastida
AMTR_s00061p00207600	evm_27.TU.AmTr_v1...	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00088p00057720	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00090p00087950	evm_27.TU.AmTr_v1...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00090p00137350	evm_27.TU.AmTr_v1...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00148p00037160	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.07	Archaeplastida
AMTR_s00205p00026120	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s02154p00002280	evm_27.TU.AmTr_v1...	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.03	Archaeplastida
AT1G10920	LOV1	NB-ARC domain-containing disease resistance protein	0.04	Archaeplastida
AT1G50180	No alias	NB-ARC domain-containing disease resistance protein	0.03	Archaeplastida
AT1G58602	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Archaeplastida
AT1G59620	CW9	Disease resistance protein (CC-NBS-LRR class) family	0.03	Archaeplastida
AT3G46530	RPP13	NB-ARC domain-containing disease resistance protein	0.03	Archaeplastida
AT3G46710	No alias	NB-ARC domain-containing disease resistance protein	0.03	Archaeplastida
AT5G35450	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Archaeplastida
AT5G43470	HRT, RCY1, RPP8	Disease resistance protein (CC-NBS-LRR class) family	0.02	Archaeplastida
ChrUn.fgenesh.mRNA.29	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
GSVIVT01007238001	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01024114001	No alias	External stimuli response.biotic stress.pathogen...	0.02	Archaeplastida
GSVIVT01032825001	No alias	Putative disease resistance protein At1g50180...	0.02	Archaeplastida
Gb_35026	No alias	Disease resistance protein RPP8 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os04g14220.2	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os08g16070.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os09g34150.1	No alias	no description available(sp\|f7j0m6\|rga4s_orysj : 234.0)	0.04	Archaeplastida
LOC_Os11g11960.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os11g11990.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os11g12300.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_10429865g0010	No alias	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.02	Archaeplastida
MA_10429865g0020	No alias	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.04	Archaeplastida
MA_10432037g0020	No alias	Putative disease resistance protein RGA4 OS=Solanum...	0.02	Archaeplastida
MA_10436323g0010	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.03	Archaeplastida
MA_131896g0010	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.02	Archaeplastida
MA_253772g0010	No alias	Probable disease resistance protein At5g63020...	0.02	Archaeplastida
MA_9778300g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
Solyc02g084890.3.1	No alias	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.03	Archaeplastida
Zm00001e024479_P001	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e029265_P001	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e029269_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0008146	sulfotransferase activity	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0042623	ATPase activity, coupled	IEP	Neighborhood
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	158	391
IPR001611	Leu-rich_rpt	539	599

External Links

No external refs found!

MA_10297274g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation