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  5. MA_10320110g0010

MA_10320110g0010


Description : Pectate lyase 1 OS=Chamaecyparis obtusa (sp|q96385|ply1_chaob : 105.0)


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0010441 (LandPlants) Phylogenetic Tree(s): OG_05_0010441_tree ,
OG_06_0010429 (SeedPlants) Phylogenetic Tree(s): OG_06_0010429_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10320110g0010
Cluster HCCA: Cluster_610

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00173370 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
Gb_04026 No alias pectate lyase 0.02 Archaeplastida
Gb_37157 No alias Probable pectate lyase 9 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo88799 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
Solyc02g080910.4.1 No alias pectate lyase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!